Part of scaffold_3559 (Scaffold)

For more information consult the page for scaffold_3559 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM36 ENSTTRG00000006172 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 36

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005838, Bottlenosed dolphin)

Protein Percentage 97.77%
cDNA percentage 97.77%
Ka/Ks Ratio 0.2638 (Ka = 0.0136, Ks = 0.0516)

TRIM36 ENSBTAG00000014027 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRIM36

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018634, Cow)

Protein Percentage 96.65%
cDNA percentage 92.1%
Ka/Ks Ratio 0.05833 (Ka = 0.0189, Ks = 0.3233)

TRIM36  (Minke Whale)

Gene Details

tripartite motif containing 36

External Links

Gene match (Identifier: BACU014973, Minke Whale)

Protein Percentage 98.2%
cDNA percentage 97.8%
Ka/Ks Ratio 0.20824 (Ka = 0.0119, Ks = 0.057)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2184 bp    Location:104487..67746   Strand:-
>bmy_22091
ATGGAGGGGGATGGTTCAGACTCGCTGGTTACCATTAAGAATATCGAAAGAGAGCTCATTTGCCCGGCATGCAAGGAGCTGTTTACCCACCCATTGATTCTCCCTTGTCAACATAGTATCTGTCATAAATGTGTAAAAGAACTCTTACTGATGCTTGATGATTCATTCAATGACGTGGGATCAGACAACTCCAATCAGAGCAGTCCTCGACTTCGGCTTCCTTCCCCTAGCATGGATAAAATTGACAGAATTAGCAGACCAGCATCACAACGGAGATCTTTGGGGTGGAGAGGCTGGAAGCGCAATTCATTGACCCCTAGGACAACTACTTTTCCTTGTCCTGGCTGTGAACATGATGTGGATCTTGGAGAACGGGGAATCAACGGTCTGTTTCGAAATTTCACTTTGGAAACTATTGTTGAAAGATATCGTCAGGCAGCCAGGGCAGCCACAGCCATTATGTGTGACCTTTGTAAACCACCACCTCAAGAATCCACAAAAAGTTGCATGGACTGTAGTGCAAGCTACTGCAATGAATGCTTCAAAATTTATCATCCCTGGGGTACTGTAAAAGCGCAGCATGAGTATGTGGGCCCAACTACGAATTTTAGACCCAAGATTTTAATGTGCCCAGAACATGAAACGGAGAGAATAAACATGTACTGTGAATTATGTAGGAGGCCAGTTTGTCATCTCTGTAAGTTGGGTGGTAATCATTCCAACCACCGTGTAACCACTATGAGCAGTGCCTACAAAACCTTAAAGGAAAAGCTTTCAAAAGATATTGATTACCTTATTGGCAAGGAGAGCCAGGTGAAGAGTCAGATTTCTGAACTAAACTTGTTRATGAAAGAAACGGAGTGTAATGGAGAACGGGCTAAAGAAGAAGCAATTACACATTTTGAAAAGCTCTTTGAAATCCTAGGAGAGAGGAAATCATCTGTTTTGAAGGCAATTGATGCTTCTAAGAAACTAAGATTAGACAAATTTCAGACTCAAATGGAAGAGTATCAGGGGCTGCTAGAGAACAACGGACTCGTGGGATACGCTCAAGAAGTGCTGAAGGAGACAGATCAGTCTTGCTTTGTTCAGACCGCAAAACAGCTCCACCTCAGAATACAGAAAGCTACAGAATCTTTGAAGAGCTTTAGACCTGCGGCTCAGACTTCTTTTGAAGACTATGTTGTTAATACATCTAAACAAACAGAACTTCTTGGAGAATTGTCCTTTTTCTCTAGTGGCTTAGATGTGCCAGAGATCAATGAGGAACAGAGCAAAATTTATAACAATGCTTTGATAAATTGGCACCATCCAGAAAAGGATAAAGCTGATAGCTATGTCCTCGAATATCGGAAGATTAATAGAGATGAAGAAATGTTGTCTTGGAATGAGATAGAAGTGTGTGGCACRAGTAAAGTCATTTCCGATCTTGAAAGTAATTGTAACTATGCTTTCAGAGTAAGAGCCTACAAGGGTTCAATCTGCAGTCCTTGCAGCAGGGAATTGATTCTTCATACTCCTCCAGCTCCAGTTTTCAGTTTCCTTTTTGATGAAAAATGCGGCTATAATAATGAACACCTCTTGCTGAACTTGAAGAGAGACCGTGTAGAGAGCAGAGCTGGATTTAATCTTCTCCTTGCTGCGGAGCGGATCCAAGTGGGTTACTTCACAAGCTTAGACTACATCATTGGAGATGTTGGAATTACAAAAGGGAAACACTTTTGGGCCTTCCGTGTAGAACCATATTCATACCTGGTAAAAGTGGGAGTTGCTTCCAGTGATAAACTACAAGAATGGCTCCGGTCTCCCCGGGATGCAGTTAGTCCAAGATACGAGCAAGACAGTGGGCATGACAGCGGAAGTGAGGATACCTGTTTTGATTCTTCACAACCCTTTACGTTAGTTACTATAGGCATGAAGAAATTTTTTATTCCCAAGTCACCTACTTCTTCTAATGAACCTGAAAATCGAGTTCTCCCCATGCCAACAAGTATAGGGGTTTTCCTCGACTAYGATAAAGGCAAAGTGGGTTTCTATGATATGGATCACATGAAATGCCTTTATGAGCGCCAAGTGGACTGTTCGCATACTATGTATCCAGCATTTGCATTAATGGGCAGTGGAGGAATTCAGCTTGAAGAACCCATCACAGCAAAATATCTAGAATACCAAGAGACCATGTAG

Related Sequences

bmy_22091T0 Protein

Length: 728 aa      View alignments
>bmy_22091T0
MEGDGSDSLVTIKNIERELICPACKELFTHPLILPCQHSICHKCVKELLLMLDDSFNDVGSDNSNQSSPRLRLPSPSMDKIDRISRPASQRRSLGWRGWKRNSLTPRTTTFPCPGCEHDVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCNECFKIYHPWGTVKAQHEYVGPTTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGNHSNHRVTTMSSAYKTLKEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAITHFEKLFEILGERKSSVLKAIDASKKLRLDKFQTQMEEYQGLLENNGLVGYAQEVLKETDQSCFVQTAKQLHLRIQKATESLKSFRPAAQTSFEDYVVNTSKQTELLGELSFFSSGLDVPEINEEQSKIYNNALINWHHPEKDKADSYVLEYRKINRDEEMLSWNEIEVCGTSKVISDLESNCNYAFRVRAYKGSICSPCSRELILHTPPAPVFSFLFDEKCGYNNEHLLLNLKRDRVESRAGFNLLLAAERIQVGYFTSLDYIIGDVGITKGKHFWAFRVEPYSYLVKVGVASSDKLQEWLRSPRDAVSPRYEQDSGHDSGSEDTCFDSSQPFTLVTIGMKKFFIPKSPTSSNEPENRVLPMPTSIGVFLDYDKGKVGFYDMDHMKCLYERQVDCSHTMYPAFALMGSGGIQLEEPITAKYLEYQETM*