Part of scaffold_3561 (Scaffold)

For more information consult the page for scaffold_3561 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NOD1 ENSTTRG00000011091 (Bottlenosed dolphin)

Gene Details

nucleotide-binding oligomerization domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010516, Bottlenosed dolphin)

Protein Percentage 95.35%
cDNA percentage 96.98%
Ka/Ks Ratio 0.23922 (Ka = 0.0206, Ks = 0.0862)

NOD1 ENSBTAG00000038235 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053171, Cow)

Protein Percentage 88.25%
cDNA percentage 90.86%
Ka/Ks Ratio 0.15521 (Ka = 0.0546, Ks = 0.3517)

NOD1  (Minke Whale)

Gene Details

nucleotide-binding oligomerization domain containing 1

External Links

Gene match (Identifier: BACU005841, Minke Whale)

Protein Percentage 97.16%
cDNA percentage 98.53%
Ka/Ks Ratio 0.30989 (Ka = 0.0114, Ks = 0.0369)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2451 bp    Location:16779..4496   Strand:-
>bmy_22094
ATGGAAAAGCAGGGCCGCAGTGAGATGGAAATAATCCCGTCAGAGTCTCAGTCCTACATCAAATTGTTGAAAGTCAACCGGGAGCATCTGGTCACTCACGTCCGCAACACTCAGTGTCTGCTGGACAACTTGTTGCAGAATGACTACTTCTCCACCGAAGACGTGGAGATCGTGTGTGCCTGCCCCACGCAGCCCGACAAGGTCCGCAAAATTCTGGACCTGGTGCAGAGCAAGGGCGAGGAGGTGTCCGAGTTCTTCCTCTGTGTGCTACAGCGACTCACAGACGCTTACGTGGACCTCAGGCCTTGGCTGTCGGAGATCAGCTTCTCCCCTTCCCAGCTCATTCAGAGCAAAGCTGTTGTCAACACCGATCCAGTGAGCAGATACAGCCAGAAGCTGCGACAGCAACTGGGCCGTGACTCCAAGTTCATCCTGTGCTACGCCCAGAAGGAGGAGCTGCTGCTGGAGGAGATGTACACGGACACCATCGTGGAGCTGGTCGACTTCGCCAACGAGAGCCTGGGCAACCTGGGCAGCCTGGCCTGCCTCCTGGACCCCTCCACGGGCGTCCTCAATGAGCACGGCGAGACCATCTTCGTCTTCGGTGACGCGGGCGTGGGCAAGTCCATGCTGCTGCAGCGGCTGCAGAGCCTCTGGGCCGCGGGCCAGCTGGACGCTGAGCTCAGGTTCTTCTTCCACTTCCGCTGCCGCACCTTCAGCTGCTTCAAGGAGAGCGCCTCGCTGTGCCTGCGGGACCTGCTCTTCAAGCACTACTGCTACCCGGAGCAGGACCCCGAGGAGGTGTTCGCCTTCCTGCTGCGCTTCCCGCACACGGCCCTCTTCACCTTCGACGGCCTGGACGAGCTCCACTCGGACTTCGACCTGAGCCGCGAGCCCGACACCTCCTCCCCCTGGGAGCCCGCCCACCCCCTGGTCCTGCTGGCCAACCTGCTCAGCGGGAAGCTGCTCAAGGGGGCGCGCAAGCTGCTCACGGCCCGCACGGGCGTCGAGATCCCGCGGCATCTCCTCTGGAAGAAGGTGTTCCTGCGCGGCTTCTCCCCCAGCCACCTGCGCGCCTACGCTGGGAGGATGTTCCCCGAGCGCGCCGTGCGCCAGCGCCTGCTGGATCAGCTGGAAGCCAACGCCAACCTCTTCAGCCTGTGCGCCGTGCCCCTCTTCTGCTGGATCATCTTCCGGTGCTTCCAGCACTTCTACGACGCCTTCGACGGCTCCCCGCAGCTGCCCGACCGCACGGTGACGCTGACCGACGTCTTCCTGCTGGTCACCGAGGTCCACCTGAACAGGACGCAGCCCACCAGCCTGGTGCAGCGGAACACGCGGAGCCAGACGGAGACCTTCCGCGCCGGCCGGGGCACCCTGCGCTCGCTGGGCCAGGTGGCTCACTGGGGCATGGAGAAGAGCTTCTTCGTCTTCAGCCAGGAGGAGGTGCAGGCGTCCGAGGTGCAGGAGGGGGACCTAAAGCTGGGTTTCTTGCGGGCCGTGCCGGAGCTGGGCCTCAGAGGGGACCAGCAGTCCTACGAGTTTTTCCACCTCACCCTCCAGGCCTTCTTTGCTGCCTTTTTTCTGGTGGTGGATGACAAGGTGGGCACTCGGGAGCTGCTCCGGTTCTTCCAGGAGTGGGCTCCTCACGGGGAGGCAGCAGCTGCGTCCTGCTATCCCCGCTTCCTACCCATCCAGTGCCTGGGGGGCCGCGGCCTGGCCGGGGAAGACCCCTTTAAGAACAAGGATCACTTTCATTTCACCAACCTCTTCCTGTGTGGGCTGTTGTCCAAAGGCAAACAGAAACTCCTGCGGCACCTGGTGCCTGCCGCCGCCCTGCGGAGAAAGCGCAGGGCCCTGTGGGCTTACCTGTTCGCCAGCCTGCGCTCCCACCTGAAGAACCTGCCCCGAGTTCAGTCTGGAGGCTTCAGCCAGGTGCAGGCCATGCCCACCTTCCTCTGGATGCTGCGCTGCATCTACGAGACGCAGAGCGAGAAGGTGGGGCAGCTGGCGGCCAGGGGCATCTGCGCCAACTACCTCAAGCTGACCTTTTGCAACGCCTGTTCGGCCGACTGCAGCGCCCTCTCCTTCGTCCTGCACCACTTCCCCAAGCGGCTTGCGCTCGACCTGGACAACAACAATGTCAACGACTATGGTGTGCGGGAACTGCAGCCCTGCTTCAGCCGCCTCACCGTCATCAGACTCAGTGTGAACCAGATCACCGACACTGGGGTGAAGGTGCTATGTGAAGAGCTGACCAAATACAAAATTCTGACATTTTTAGGCTTATACAACAACCAAATCACCGATGTCGGAGCCAGGTACGTCGCCAGAATCCTGGATGAGTGCCCAGGCCTCACGCACCTGAAACTGGGAAAAAACAAAATAACAAGCGAAGGAGGAAAGTGTCTCGCCCTGGCTGTGAAGAACAGCAAATCCATCTTTGAAGTT

Related Sequences

bmy_22094T0 Protein

Length: 817 aa      View alignments
>bmy_22094T0
MEKQGRSEMEIIPSESQSYIKLLKVNREHLVTHVRNTQCLLDNLLQNDYFSTEDVEIVCACPTQPDKVRKILDLVQSKGEEVSEFFLCVLQRLTDAYVDLRPWLSEISFSPSQLIQSKAVVNTDPVSRYSQKLRQQLGRDSKFILCYAQKEELLLEEMYTDTIVELVDFANESLGNLGSLACLLDPSTGVLNEHGETIFVFGDAGVGKSMLLQRLQSLWAAGQLDAELRFFFHFRCRTFSCFKESASLCLRDLLFKHYCYPEQDPEEVFAFLLRFPHTALFTFDGLDELHSDFDLSREPDTSSPWEPAHPLVLLANLLSGKLLKGARKLLTARTGVEIPRHLLWKKVFLRGFSPSHLRAYAGRMFPERAVRQRLLDQLEANANLFSLCAVPLFCWIIFRCFQHFYDAFDGSPQLPDRTVTLTDVFLLVTEVHLNRTQPTSLVQRNTRSQTETFRAGRGTLRSLGQVAHWGMEKSFFVFSQEEVQASEVQEGDLKLGFLRAVPELGLRGDQQSYEFFHLTLQAFFAAFFLVVDDKVGTRELLRFFQEWAPHGEAAAASCYPRFLPIQCLGGRGLAGEDPFKNKDHFHFTNLFLCGLLSKGKQKLLRHLVPAAALRRKRRALWAYLFASLRSHLKNLPRVQSGGFSQVQAMPTFLWMLRCIYETQSEKVGQLAARGICANYLKLTFCNACSADCSALSFVLHHFPKRLALDLDNNNVNDYGVRELQPCFSRLTVIRLSVNQITDTGVKVLCEELTKYKILTFLGLYNNQITDVGARYVARILDECPGLTHLKLGKNKITSEGGKCLALAVKNSKSIFEV