Part of scaffold_3582 (Scaffold)

For more information consult the page for scaffold_3582 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMC3 ENSTTRG00000003923 (Bottlenosed dolphin)

Gene Details

laminin, gamma 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003693, Bottlenosed dolphin)

Protein Percentage 91.79%
cDNA percentage 94.24%
Ka/Ks Ratio 0.28725 (Ka = 0.037, Ks = 0.1288)

LAMC3 ENSBTAG00000017473 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023245, Cow)

Protein Percentage 69.82%
cDNA percentage 75.32%
Ka/Ks Ratio 0.25795 (Ka = 0.2217, Ks = 0.8596)

LAMC3  (Minke Whale)

Gene Details

laminin, gamma 3

External Links

Gene match (Identifier: BACU016207, Minke Whale)

Protein Percentage 94.43%
cDNA percentage 95.61%
Ka/Ks Ratio 0.31285 (Ka = 0.018, Ks = 0.0574)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2805 bp    Location:35097..615   Strand:-
>bmy_22098
GGTCCACGTCTTCCCACTGCAGGGAAAGCTTACGAGATCACCTACGTGCGGCTGAAGTTCCACACCAGCCGCCCTGAGAGCTTCGCCATCTACAAGCGCAGCCGGGCCGGCGGTCCCTGGGAGCCCTACCAGTACTACAGCGCCTCCTGCCAGACGACCTACGGCAAGCCTGAGAGCCAGTACCTGCGCCCCGGCGAGGACGAGCGCGTGGCCTTCTGCACCTCCGAGTTCAGCGACATCTCCCCGCTGAGCGGGGGCAACGTGGCCTTCTCCACCCTGGAGGGCCGGCCCAGTGCCTACAACTTTGAGGAGAGCCCCGTGTTGCAGGACTGGGTCACCAGCACCGAGCTCCTCATCTCCCTAGACCGGCTCAACACGTTTGGGGATGACATCTTCAAGGACCCCAAGGTGCTGCAGTCCTACTACTACGCCGTGTCGGACTTCTCTGTGGGTGGCAGGTGCAAGTGCAACGGGCACGCCGGCGAGTGTGGCCCCAACGAGGCGGGCCGGCTGGTCTGCCGATGCCAGCACAACACCATGGGCCCAGACTGTGAGCGCTGCCTGCCCTTCTTCCGGGACCGCCCGTGGGCCCGGGGCACGGCCGAGGCGGCCAGCGAGTGTCTGCCTTGCAACTGCAGCGGCCACTCTGAGGAGTGCATGTTTGACCGGGAGCTCTTCCGCAGCTCGGGCCATGGTGGGCGTTGCCTCCGCTGCCGTGACCACACAGCCGGGCCACACTGTGAGCGCTGCCAGGAGAACTTCTATCGCTGGAAGCCACGGACGCCATGCCAGCCCTGCGACTGCCACCCAGCAGGCTCCCTGCACCTCCAGTGCAATGACTCCGGCACCTGCATCTGCAAGCCCACGGTGACGGGCTGGAAGTGTGACCGCTGCCTGCCCGGGTTCCACTCGCTCAGTGAGGGCGGCTGCAGACCCTGTACCTGCAATCCCGCTGGCAGCCTGGGCACCTGTGATCCCCGCAGTGGCCGCTGCCCCTGCAAAGAGAATGTGGAAGGCAACCTGTGTGACAGATGTCGCCCGGGCACGTTTAGCCTGCAGTCCCACAGCCCAGCCGGCTGCCGCAGCTGCTTCTGCTACGGCCACTCCAGGGCGTGTGCGGCCGCTCCCCACTTCCGGGAGTACCACATCCTCTCCGACTTCCGCCGGGAGAAGTTCCTGGGAGACCAGCGGCTCAGCTATGGGCAGCCCCTCACACTGACATTCCGGGTCCCCCCCAGGGGCTCCCCCATCCCTGCGAGGCTGAGGCTGGAAGGGGCGGGTCTGACCTTGACTCTGCGGCATTCCAGCTCGCCCAGCCCCCTGGACGCCAGGCAGCCGGGGGAGGTACAGCTCAAGTTCCTGTTGCAAGAGACCTCCGAGGACGTGGACCCTCCGCTGCCCCCCTTCCATTTCCAGCGGCTGCTCACCAATCTGACTGCTCTGTGCATCCAGGCCAGCCCAGTGTTCCTGACTGAGGTCCGGCTCACGTCGGCCCGGCGGGGGCTCTCCCCCCCAGCCTCCTGGGTGGAGACTTGCTCATGTCCCAGGGGCTACACGGGCCAGTTCTGTGAGTCCTGTGCTCTGGGATACAAGAGGGAGACACCACTGGGGGGTCCCTATGCCAGCTGTGTTCCCTGCACCTGTAACCAGCATGGCACCTGTGACCCCAACACAGGGATCTGCCTATGCGGCCACCACACCGAGGGCCCGTCCTGTGAGCACTGCTTGCCAGGTTTCTACGGCAACCCCTTCACAGGCCAAGCCGATGACTGCCAGCCCTGTCCGTGCCCTGGACAGTCGGCCTGCATGACCATCCCAGAGAGCAGAGAGGTGGTGTGTACCCACTGCCCCCCGGGCCAGAGAGGGTGGCGCTGTGAGATCTGTGATGATGGCTTTTTTGGGGACCCGCTGGGGCTCTCTGGGGCCCCTCAGCCCTGCCAGCTGTGTCAGTGCAGTGGGAACGTGGACCCCAACGCAGTGGGCAACTGTGACCCCCTGTCTGGCCGCTGCCTGCGATGCCTACACAACACGACAGGTGCCCACTGTGAGAGCTGTCAGGAAGGCTTCTACGGGAGTGCCCTGTCCCCTCGGCCCGCAGACAAATGCGTGCCCTGCAGCTGCAACCAGAAGGGCTCAGTCAGTGAGCAGAGACCCTGTGACCCAGTGACCGGCCAGTGCTCCTGCCTGCCTCACGTGACCGGACGGGACTGTGGCCACTGCAGCCCTGGCTTCTACGACCTCCAGCCTGGCAGGGGCTGCCGGAGCTGCAAGTGCCACCCGCTGGGCTCCCAGGAGGACCAGTGCCACCCCAAGACCGGGCAGTGCCCCTGCCGTCCAGGCGTCGAGGGCCAGGCCTGTGACAGATGCCAGCTGGGTTTCTTCGGCTTCTCCATCAAGGGCTGCCGGGCCTGCAGGTGCTCCCCGCTGGGCGCCGCCTCGGCCCAATGTCATGAGAACAGCACGTGTGTGTGCAAGCCCGGCTTTGTGGGCTACAAGTGTGACCTCTGCCAGGACAACTTCTTCCTCACGGCCGGTGGCACAAACTGCCAGGAGTGCCCGTCCTGCTACGCCCTGGTGAAGAAGGAGGCTGCCAAGCTGAAGGCCAGACTGACCCTGATGGAAGGGTGGCTGCAGGGGTCAAACTGTGGCAGGCCCTGGGCACCACTGGACATTCTACAGGGAGAGGCCCCACGGGGGGACGTCTACCAGGGCCACCCCCTGCTGCAAGGTGATTCCTCAGGAAGGGCTCGGCCAGCCCACCAACTGGAGCCACCTGGCCATAGAGGCCCGTGCCCTCGCCAGGAG

Related Sequences

bmy_22098T0 Protein

Length: 935 aa      View alignments
>bmy_22098T0
GPRLPTAGKAYEITYVRLKFHTSRPESFAIYKRSRAGGPWEPYQYYSASCQTTYGKPESQYLRPGEDERVAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEESPVLQDWVTSTELLISLDRLNTFGDDIFKDPKVLQSYYYAVSDFSVGGRCKCNGHAGECGPNEAGRLVCRCQHNTMGPDCERCLPFFRDRPWARGTAEAASECLPCNCSGHSEECMFDRELFRSSGHGGRCLRCRDHTAGPHCERCQENFYRWKPRTPCQPCDCHPAGSLHLQCNDSGTCICKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLGTCDPRSGRCPCKENVEGNLCDRCRPGTFSLQSHSPAGCRSCFCYGHSRACAAAPHFREYHILSDFRREKFLGDQRLSYGQPLTLTFRVPPRGSPIPARLRLEGAGLTLTLRHSSSPSPLDARQPGEVQLKFLLQETSEDVDPPLPPFHFQRLLTNLTALCIQASPVFLTEVRLTSARRGLSPPASWVETCSCPRGYTGQFCESCALGYKRETPLGGPYASCVPCTCNQHGTCDPNTGICLCGHHTEGPSCEHCLPGFYGNPFTGQADDCQPCPCPGQSACMTIPESREVVCTHCPPGQRGWRCEICDDGFFGDPLGLSGAPQPCQLCQCSGNVDPNAVGNCDPLSGRCLRCLHNTTGAHCESCQEGFYGSALSPRPADKCVPCSCNQKGSVSEQRPCDPVTGQCSCLPHVTGRDCGHCSPGFYDLQPGRGCRSCKCHPLGSQEDQCHPKTGQCPCRPGVEGQACDRCQLGFFGFSIKGCRACRCSPLGAASAQCHENSTCVCKPGFVGYKCDLCQDNFFLTAGGTNCQECPSCYALVKKEAAKLKARLTLMEGWLQGSNCGRPWAPLDILQGEAPRGDVYQGHPLLQGDSSGRARPAHQLEPPGHRGPCPRQE