Part of scaffold_3699 (Scaffold)

For more information consult the page for scaffold_3699 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPF1 ENSTTRG00000000789 (Bottlenosed dolphin)

Gene Details

ribosome production factor 1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000742, Bottlenosed dolphin)

Protein Percentage 97.12%
cDNA percentage 97.98%
Ka/Ks Ratio 0.3737 (Ka = 0.0153, Ks = 0.041)

BXDC5 ENSBTAG00000008118 (Cow)

Gene Details

ribosome production factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010676, Cow)

Protein Percentage 95.1%
cDNA percentage 94.52%
Ka/Ks Ratio 0.16532 (Ka = 0.0264, Ks = 0.1596)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1137 bp    Location:9805..29383   Strand:+
>bmy_22168
ACCTTTCCGACCCCGGAAGTAATAGCTTACGGACGGGGGTCGGAGGAGAAAGCTACTTCCGTTTCCGTACAGACCACAAGGAGCAAAAATACCATGGCGAAGGCTGGGGATAAGAGCGGCGGCAGCGGAAACAAAGGCTTGAAACGCAAAGCCGCTACTGAAGAACGTCAGGAGGCTGCAGTCGCTGAGGATGGGACGACGGAAAGTGGGGTCCAACCCTCGAAGGCGGCTGCCTTTCCTCCAGGCTTCAGCGTTTCGGAGATTAAGAACAAACAGCGGCGACACTTAATGTTCACGCGGTGGAAACAGCAGCAGCGGAAGGAAAAGTTGGCAGCTAAGAAAAAACTTAAAAAAGAGAGAGAGGCTCTTGGTGATAAGGCTCCACCAAAGCCTATACCGAAGACCATCGACAACCAGCGAGTGTATGATGAAACCACAGTAGACCCTAATGATGAAGAGGTTGCTTATGATGAAGCTACGGATGAATTTGCTTCTTACTTCAACAGACAAACTTCTCCCAAGATTCTCATCACTACATCAGATAGACCTCATGGGAGAACAGTACGACTCTGTGAACAGCTCTCCACAGTTATACCAAACTCACATGTTTATTACAGAAGAGGACTGGCTCTGAAAAAAATTATTCCACAGTGCATCTCAAGAGATTTCACAGACCTGATTGTTAAGTATTTGAAAGAATCAGATGGATTAATTCTGAGTCACTTGCCAAATGGCCCAACTGCTCATTTTAAAATGAGCAGTGTTCGTCTGCGTAAAGAAATTAAGAGAAGAGGCAAGGAGCCCACAGAACACATACCTGAAATAATTTTAAACAATTTTACCACACGGCTGGGTCATTCTGTTGGACGTATGTTTGCATCTCTCTTTCCCCATAATCCTCAATTTACTGGAAGGCAGGTTGCCACATTCCACAATCAACGGGATTATATCTTCTTCAGATTTCACAGATACATATTCAAGAGTGAAAAGAAAGTCGGAATTCAGGAACTTGGACCACGTTTTACCTTAAAATTAAGATCTCTTCAGAAAGGAACCTTTGATTCTAAATATGGAGAATATGAATGGGTCCATAAGCCCCGGGAAATGGATACAAGTAGAAGAAAATTCCATTTATAA

Related Sequences

bmy_22168T0 Protein

Length: 379 aa      View alignments
>bmy_22168T0
TFPTPEVIAYGRGSEEKATSVSVQTTRSKNTMAKAGDKSGGSGNKGLKRKAATEERQEAAVAEDGTTESGVQPSKAAAFPPGFSVSEIKNKQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPIPKTIDNQRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCISRDFTDLIVKYLKESDGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKEPTEHIPEIILNNFTTRLGHSVGRMFASLFPHNPQFTGRQVATFHNQRDYIFFRFHRYIFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRKFHL*