Sequence details bmy_22193 (Coding sequence)

Part of scaffold_3720 (Scaffold)

For more information consult the page for scaffold_3720 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDC42EP5 ENSTTRG00000006589 (Bottlenosed dolphin)

Gene Details

CDC42 effector protein (Rho GTPase binding) 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006233, Bottlenosed dolphin)

Protein Percentage 99.32%
cDNA percentage 98.2%
Ka/Ks Ratio 0.02717 (Ka = 0.0027, Ks = 0.1012)

CDC42EP5 ENSBTAG00000045989 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055165, Cow)

Protein Percentage 93.24%
cDNA percentage 92.57%
Ka/Ks Ratio 0.07036 (Ka = 0.0306, Ks = 0.4354)

Additional orthologs identified in other species via the OPTIC pipeline.

CDC42EP5 (Human)   Cdc42ep5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 447 bp    Location:10488..15524   Strand:+
Raw sequence 
>bmy_22193
ATGCCGGTCCTGAAGCAGCTGGGCCCCGCGCAGCCCAAGAAGCGGCCGGAGCGCGGCGCTCTGTCCATCTCCGCGCCGCTCGGCGACTTCCGGCACACTCTGCACGTGGGCCGCGGCGGCGACGCCTTCGGAGACACTTCCTTCCTGAGCCGCCACGGCGGCGGGCCGCCCCCTGAGCCCCGGCCGCCGCCCGCGGGGGCCCCGCGCTCCGCGCCGCAGCCCCCGCCGCCCGCCCTCCGCGCGCCAGCGCCCGCCGACCCGCTGCTGTCCTTCCACCTGGATTTGGGCCCCTCCATGCTGGACGCAGTGCTGGGCGTCATGGACGCGGAACGCCCGGGCGCCGCCGCCGCCAAGCCCGACGTGGACCCCGGCCCCGGGGCGCAGCACCCTAGTGCCCGCTGCCTCCCCAACGCGGACCTCGAGCTGGACGACGTCATCGGCCTGTAG

Related Sequences

bmy_22193T0 Protein

Length: 149 aa      View alignments
>bmy_22193T0
MPVLKQLGPAQPKKRPERGALSISAPLGDFRHTLHVGRGGDAFGDTSFLSRHGGGPPPEPRPPPAGAPRSAPQPPPPALRAPAPADPLLSFHLDLGPSMLDAVLGVMDAERPGAAAAKPDVDPGPGAQHPSARCLPNADLELDDVIGL*