Part of scaffold_3756 (Scaffold)

For more information consult the page for scaffold_3756 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HTR5A ENSTTRG00000010164 (Bottlenosed dolphin)

Gene Details

5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009638, Bottlenosed dolphin)

Protein Percentage 79.93%
cDNA percentage 83.58%
Ka/Ks Ratio 0.35462 (Ka = 0.0985, Ks = 0.2777)

BT.40017 ENSBTAG00000002891 (Cow)

Gene Details

5-hydroxytryptamine receptor 5A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003759, Cow)

Protein Percentage 84.67%
cDNA percentage 86.98%
Ka/Ks Ratio 0.2 (Ka = 0.0942, Ks = 0.471)

HTR5A  (Minke Whale)

Gene Details

5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled

External Links

Gene match (Identifier: BACU000739, Minke Whale)

Protein Percentage 87.96%
cDNA percentage 91.24%
Ka/Ks Ratio 0.44383 (Ka = 0.0785, Ks = 0.177)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 825 bp    Location:8950..8126   Strand:-
>bmy_22203
ATGGATCGGCCTGTGAACCTCACCTACTTTGTCCTCTCCACCCCCGCCCCTCTGGAGACCAACCGCAGCTTCGACGCAGAAGACCCGCGCCCCAGCCTGCCCCTCCTCTCCGTCTTCGGCGTGCTTGTTCTCACCCTGCTGGGCTTCCTGGTGGCAGCGACGTTCGCCTGGAACCTGCTGGTGCTGGCGACCATTCTCCGCGTGCGCACGTTCCATCGCGTTCCGCACAACCTGGTGGCATCCATGGCCATCTCGGACGTGCTGGTGGCTGCTCTGGTCATGCCGCTGAGCCTGGTGCACGAGCTGTCCGGGCGCCGCTGGCAGCTGGGCCGGCGGCTGTGCCAGCTTTGGATCGCATGCGACGTGCTCTGCTGCACGGCCAGCATCTGGAATGTGACGGCCATCGCGCTGGACCGCTACTGGTCCATCACCCGTCACCTGGAATACACGCTGCGCGTCCGCAAGCGCGTCTCCAACGTAATGATCACGCTCACCTGGGCGCTCTCCGCAGTCATCTCCCTGGCCCCGCTGCTCTTCGGCTGGGGGGAGACCTACTCTGAGGGCAGCGAGGAGTGCCAGGTGAGCCGCGAGCCCTCCTACACCGTGTTCTCCACCGTGGGCGCCTTCTACCTGCCGCTCTGCGTGGTGCTCTTCGTGTACTGGAAGATCTACAAGGCGGCCAAGGTCCGCGTGGGCCCCCGGAAGGCCAACAGCGTCTCCCCCGTATCCGAAGCTGTGGAGGTGGGTGTTAACGTGATCCTTAAAAATACTTGGCTTGCATCTGCCCAGGCCTCATCCCCAGCACATCTCCCCACACATCCGTAG

Related Sequences

bmy_22203T0 Protein

Length: 275 aa      View alignments
>bmy_22203T0
MDRPVNLTYFVLSTPAPLETNRSFDAEDPRPSLPLLSVFGVLVLTLLGFLVAATFAWNLLVLATILRVRTFHRVPHNLVASMAISDVLVAALVMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAIALDRYWSITRHLEYTLRVRKRVSNVMITLTWALSAVISLAPLLFGWGETYSEGSEECQVSREPSYTVFSTVGAFYLPLCVVLFVYWKIYKAAKVRVGPRKANSVSPVSEAVEVGVNVILKNTWLASAQASSPAHLPTHP*