Part of scaffold_3729 (Scaffold)

For more information consult the page for scaffold_3729 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VSX2 ENSTTRG00000006446 (Bottlenosed dolphin)

Gene Details

visual system homeobox 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006101, Bottlenosed dolphin)

Protein Percentage 9.61%
cDNA percentage 28.82%
Ka/Ks Ratio 0.31351 (Ka = 1.65, Ks = 5.2629)

VSX2 ENSBTAG00000014632 (Cow)

Gene Details

visual system homeobox 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019481, Cow)

Protein Percentage 80.57%
cDNA percentage 81.67%
Ka/Ks Ratio 0.14883 (Ka = 0.1334, Ks = 0.8964)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 693 bp    Location:22568..18759   Strand:-
>bmy_22211
ATGAAAAGCCCTGGGCTGCCTGAGTCCACACTGACCTCGCCTGCCGGGACTGCTCTGGCCTCTGCGGTTCTGGACTTGTATCTCATTCTGGACACCCTGAGCCTGGAGGAACCCCAGGGGTACTTCGGGGTCTGGTTCCAGAACCGAAGAGCCAAGTGGAGGAAGCGGGAGAAGTGCTGGGGCCGGAGCAGCGTCATGGCGGAGTACGGGCTCTACGGGGCCATGGTGCGCCACTCCATCCCCCTGCCGGAGTCCATCCTCAAGTCCGCCAAGGATGGCATCATGGACTCCTGCGCCCCGTGGCTGCTGGTTCAAGATGGCTTTCCCAGGCGCTTTTCTAAACCCGAATACCAACAATTCTTTTTAGGGATGCACAAAAAGTCGCTGGAGGCGGCAGCCGAGTCGGGGAGGAAGCCCGAGGCGGAGCGTCAGGCCCTGCCCAAGCTCGACAAGATGGAGCCGGAGGAGCGGGGTCCCGACCCCCCGGCCGCCATGTCCCAGGAGGAACTGAGGGAGAACAGCATCGCCGCGCTCCGAGCCAGAGCGCAGGAGCACAGCACCAAAGTGCTGCGGACTGTGTCCGGGCCCGACAGCCTGGCCCGGAACGGTGAGGAGCCGGCGCCGGAGGAGGCCACGGACGAAGACAGGCCAGCGGAGAAGCTGAGTCCGCCGCAGCTCGAGGACATGGCTTAG

Related Sequences

bmy_22211T0 Protein

Length: 231 aa      View alignments
>bmy_22211T0
MKSPGLPESTLTSPAGTALASAVLDLYLILDTLSLEEPQGYFGVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESILKSAKDGIMDSCAPWLLVQDGFPRRFSKPEYQQFFLGMHKKSLEAAAESGRKPEAERQALPKLDKMEPEERGPDPPAAMSQEELRENSIAALRARAQEHSTKVLRTVSGPDSLARNGEEPAPEEATDEDRPAEKLSPPQLEDMA*