Sequence detailsbmy_22217 (Coding sequence)

Part of scaffold_3744 (SequenceType object (1))

For more information consult the page for scaffold_3744 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCTEX1D1ENSTTRG00000009420 (Bottlenosed dolphin)

Gene Details

Tctex1 domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008920, Bottlenosed dolphin)

Protein Percentage 95.45%
cDNA percentage 97.47%
Ka/Ks Ratio 0.50268 (Ka = 0.0186, Ks = 0.037)

TCTEX1D1ENSBTAG00000011097 (Cow)

Gene Details

tctex1 domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014729, Cow)

Protein Percentage 90.15%
cDNA percentage 93.69%
Ka/Ks Ratio 0.30255 (Ka = 0.0425, Ks = 0.1406)

Additional orthologs identified in other species via the OPTIC pipeline.

TCTEX1D1 (Human)   Tctex1d1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 399 bp    Location:6970..16269   Strand:+
Raw sequence 
>bmy_22217
ATGGATGAACCTAGCCAGCGTGAAGATGCCTCTCACTTCGCAGTTCAGATGGAAAACACCTACCAACTGGGTCCTACCAAACATTTTCCTGTTGTCATTGTCAATCATATTCTGAAAGATGTGTTAACTAACTACCTACAAGAAGAAAAATATGAACCAGAGCTCTGTAGACAGATGACTAAAACAATTTCTGAGGTTATTAAAGCCCAGGTCAAGGACTTGATGACTCCACGATATAAGCTAATTGTGATGGTTCACATTGGACAACTGACTGGCCAGAGCATACTGATTGGAAGCAGATGCCTCTGGGATCCTAAAAATGATACCTKTGCCTCTTACATTTTCAGAAATTCTTCTCTCTTTGCTCTTGCAAATGTCTACACAGTTTACTTTGAGTGA

Related Sequences

bmy_22217T0 SequenceType object (3)

Length: 133 aa      View alignments
>bmy_22217T0
MDEPSQREDASHFAVQMENTYQLGPTKHFPVVIVNHILKDVLTNYLQEEKYEPELCRQMTKTISEVIKAQVKDLMTPRYKLIVMVHIGQLTGQSILIGSRCLWDPKNDTXASYIFRNSSLFALANVYTVYFE*