Sequence details bmy_22225 (Coding sequence)

Part of scaffold_3856 (Scaffold)

For more information consult the page for scaffold_3856 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD163 ENSTTRG00000002114 (Bottlenosed dolphin)

Gene Details

CD163 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001986, Bottlenosed dolphin)

Protein Percentage 94.8%
cDNA percentage 96.28%
Ka/Ks Ratio 0.51664 (Ka = 0.0311, Ks = 0.0602)

CD163 ENSBTAG00000019669 (Cow)

Gene Details

Scavenger receptor cysteine-rich type 1 protein M130 Soluble CD163

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026215, Cow)

Protein Percentage 86.02%
cDNA percentage 88.88%
Ka/Ks Ratio 0.36251 (Ka = 0.0855, Ks = 0.2357)

CD163  (Minke Whale)

Gene Details

CD163 molecule

External Links

Gene match (Identifier: BACU003056, Minke Whale)

Protein Percentage 96.86%
cDNA percentage 97.72%
Ka/Ks Ratio 0.70062 (Ka = 0.0211, Ks = 0.0301)

Additional orthologs identified in other species via the OPTIC pipeline.

CD163 (Human)   Cd163 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2772 bp    Location:62463..83518   Strand:+
Raw sequence 
>bmy_22225
ATGGTGCTACATGAAAACTCTGGATCTACTGAATTTAGAAGATGTTCTGCCCACTTAAGTCCCTTCACTATTGCTGTGGTCTCAGTTCTCAGTGCCTGTTTGGTCACCCGTTCTCTTGGAGGAACAGACAAGGAGCTGAGGCTAACAGCTGGTGAAAACAAGTGTTCTGGGAGAGTGGAGGTGAAAGTCCAGGAGGAGTGGGGAACTGTGTGTAATAATGGCTGGGGCTTGTCCGCAGTCTCCGTTGTTTGTAGGCAGCTGGGATGTCCAACTGTTATCAAAGCCACTGGATGGGCTAATTCCAGTGCAGGCTCTGGACGCATTTGGATGGATCATGTTTCTTGTCGAGGGAATGAATCAACTCTCTGGGATTGCAAACATGATGGGTGGGGAAAGCATAACTGTACTCACCAACAGGATGTTGGAATCACCTGCTCAGATGGATCTGATTTGGAGATGAGGCTGATGAATGGAGGAAACCGGTGCTCAGGAAGAATAGAGGTCAAATTCCAAGGACAGTGGGGAACTGTGTGTGACGATAACTTCAACATAGATCATGCTTCTGTGGTTTGTAAACAACTTGAATGTGGAAGTGCTGTCAGTTTCTCTGGTTCAGCTAATTTTGGAGAAGGTTCTGGACCAATCTGGTTTGATGATCTTGTATGCAATGGAAATGAGTCAGCTCTCTGGAACTGCAAACATGAAGGATGGGGAAAGCATAATTGCGATCATGCTGAGGATGCTGGAGTGATTTGCTTAGAGGGAGCAGACCTGAGCCTGAGACTGGTAGATGGAGTCACTGAATGTTCAGGAAGATTAGAAGTGAAATTCCAAGGAGAATGGGGGACAGTGTGTGATGATGGCTGGGATAGTAACGATGCCGCTGTGGCATGTAAGCAACTGGGATGTCCAACTGCCGTCACTGCCATTGGTCGAGTCAACGCCAGTGAAGGAATTGGACACATTTGGCTTGACAGTGTTTCCTGCCATGGACATGAGTCTGCTCTCTGGCAATGTAAACACCAAGAATGGGGAAAGCATTATTGCAATCATAATGAAGATGCTGGTGTGACATGTTCTGATGGATCAGATCTGGGACTGAGACTTAAAGGTGGAGGCAGCCACTGTGCTGGGACAGTGGAGGTGGAAATTCAGAAATTGATAGGGAAAGTGTGTGACAGAGGCTGGGGACTGAAACAAGCTGATGTGGTTTGCAGGCAGCTGGGATGTGGATCTGCGCTCAAAACATCCTATCAAGCTTATTCCAAAATTAAGGCAACAAACACATGGCTGTTTTTAAGCAGCTGTAATGGAAATGAAACTTCTCTTTGGGACTGCAAGAATTGGCAATGGGCCCACAGGGAACCCAAACTAGTCGGAGGGGACATTCCCTGCTCTGGTCGTGTTGAAGTGAAACATGGCGACAGCTGGGGCACCGTCTGTGATTCTGACTTCTCTCTGGAAGCGGCCAGTGTGCTATGCAGGGAATTACAATGCGGCACAGTCGTCTCTATCCTGGGGGGAGCTCACTTTGGAGAAGGAAACGGACAGATCTGGGCTGAAGAATTCCAGTGTGAGGGGCACGAGTCCCATCTTTCACTCTGCCCAGTAGCACCCCGCCCAGACGGGACTTGTAGCCACAGCAGGGATGTTGGAGTAGTCTGCTCAAGATACACAGAAGTCCGCTTGGTTAATGGCCAGTCCCCATGTGAAGGAAGAGTGGAGCTCAAGATTCTTGGGACCTGGGGATCTCTCTGCAACTCTCACTGGGACATGGAAGATGCTCACGTTTTTTGCCAGCAGCTTAAATGTGGAGTTGCCCTTTCTACCCCAAGAGGAGCACCTTTTGGGAAAGGAAGTGGGCAGGTCTGGAGGCACATGTTTCACTGCACTGGGACTGAGCGTCACATGGGAGATTGTCCCATGACTGCTCTGGGTGCATCGCTATGTTCTTTGGGGCAAGTGGCCTCTGTAATCTGCTCAGGAAACCAGAGTCAGACACTACCCCCGTGCAATTCATCATCCTCGGACCCAACAAGCTCTATTTTTTCAGAAGAAAGTGGTGTTCCCTGCATAGGGAGTGGTCAACTTCGCCTGGTTAATGGAGGCGGGCGTTGTGCTGGGAGAATAGAGATCTATCATGAGGGCTCCTGGGGCACCATCTGTGATGACAGCTGGGACCTGAATGATGCCCAAGTGGTGTGCAAACAGCTGGGCTGTGGAGGGGCCATTAATGCCATTGGTTCTGCTCATTTTGGGGAAGGAACAGGGCCCATCTGGCTGGATGAGGTGAACTGTAATGGAAAAGAATCTCGTATTTGGCAATGCCATTCCCATGGCTGGGGGCGCCACAACTGCAGGCATAAGGAGGATGCAGGAGTTATCTGCTCAGAGTTCATGTCTCTGAGACTCATCAGTGAAACCAGCAGAGAGACCTGTGCAGGACACCTGGAAGTTTTTTACAATGGAGCTTGGGGCAGCGTTGGCAAGAGTAACATGTCTGCAGCCACGGTGGGAGTGGTATGCAGGCAGCTGGGCTGTGCGGACAAAGGGAGCATCATCCCTGCATCTTCAGACAAGACGATGTCCAGGCACATGTGGGTGGACAATGTTCAGTGTCCTAAAGGGCCTGACACCTTATGGCAGTGCCCATCATCTCCATGGAAGAAGAGACTGGCCAGCCCCTCGGAGGAGACCTGGATCACGTGTGCCAGTGAGTATCCATTTGACTATATGAAGCTTCCATTCTGTGGCTCCACTAGCATCTTCTGA

Related Sequences

bmy_22225T0 Protein

Length: 924 aa      View alignments
>bmy_22225T0
MVLHENSGSTEFRRCSAHLSPFTIAVVSVLSACLVTRSLGGTDKELRLTAGENKCSGRVEVKVQEEWGTVCNNGWGLSAVSVVCRQLGCPTVIKATGWANSSAGSGRIWMDHVSCRGNESTLWDCKHDGWGKHNCTHQQDVGITCSDGSDLEMRLMNGGNRCSGRIEVKFQGQWGTVCDDNFNIDHASVVCKQLECGSAVSFSGSANFGEGSGPIWFDDLVCNGNESALWNCKHEGWGKHNCDHAEDAGVICLEGADLSLRLVDGVTECSGRLEVKFQGEWGTVCDDGWDSNDAAVACKQLGCPTAVTAIGRVNASEGIGHIWLDSVSCHGHESALWQCKHQEWGKHYCNHNEDAGVTCSDGSDLGLRLKGGGSHCAGTVEVEIQKLIGKVCDRGWGLKQADVVCRQLGCGSALKTSYQAYSKIKATNTWLFLSSCNGNETSLWDCKNWQWAHREPKLVGGDIPCSGRVEVKHGDSWGTVCDSDFSLEAASVLCRELQCGTVVSILGGAHFGEGNGQIWAEEFQCEGHESHLSLCPVAPRPDGTCSHSRDVGVVCSRYTEVRLVNGQSPCEGRVELKILGTWGSLCNSHWDMEDAHVFCQQLKCGVALSTPRGAPFGKGSGQVWRHMFHCTGTERHMGDCPMTALGASLCSLGQVASVICSGNQSQTLPPCNSSSSDPTSSIFSEESGVPCIGSGQLRLVNGGGRCAGRIEIYHEGSWGTICDDSWDLNDAQVVCKQLGCGGAINAIGSAHFGEGTGPIWLDEVNCNGKESRIWQCHSHGWGRHNCRHKEDAGVICSEFMSLRLISETSRETCAGHLEVFYNGAWGSVGKSNMSAATVGVVCRQLGCADKGSIIPASSDKTMSRHMWVDNVQCPKGPDTLWQCPSSPWKKRLASPSEETWITCASEYPFDYMKLPFCGSTSIF*