Sequence details bmy_22244 (Coding sequence)

Part of scaffold_3807 (Scaffold)

For more information consult the page for scaffold_3807 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CXCL13 ENSTTRG00000005605 (Bottlenosed dolphin)

Gene Details

chemokine (C-X-C motif) ligand 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005289, Bottlenosed dolphin)

Protein Percentage 86.54%
cDNA percentage 93.27%
Ka/Ks Ratio 1.1847 (Ka = 0.0747, Ks = 0.063)

CXCL13  (Minke Whale)

Gene Details

chemokine (C-X-C motif) ligand 13

External Links

Gene match (Identifier: BACU019042, Minke Whale)

Protein Percentage 95.19%
cDNA percentage 98.08%
Ka/Ks Ratio 2.19275 (Ka = 0.0239, Ks = 0.0109)

Additional orthologs identified in other species via the OPTIC pipeline.

CXCL13 (Cow)   CXCL13 (Human)   Cxcl13 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 330 bp    Location:25390..30999   Strand:+
Raw sequence 
>bmy_22244
ATGAGGTTCACGCAGGGATCTCTGCTTCTTGTGCTGCTGGCCTGCAGCCTCTCTCCAGTCCGTGGTGTCCTGGAGACCTATAACACAAACTTAAAGTGTAAATGCATCCGAGAGACCTTCAACTTTGTCTCCATTTTGCTCATTGGAAAGCTTCAAATCTTGCCCCCTGGGAATGGATGTCCAAACACAGAAATCATAGCCTGGATGAAGAATAAGTCAGTTATCTGCTTGAACCCTGGAGCCAAATGGACACAAAAACTAATGAGAGTGTCAAGAAAAAGTGCATTTTCAACTTCACCAGCTCCAGTGTTTAAGAAAATGATTGCCTGA

Related Sequences

bmy_22244T0 Protein

Length: 110 aa      
>bmy_22244T0
MRFTQGSLLLVLLACSLSPVRGVLETYNTNLKCKCIRETFNFVSILLIGKLQILPPGNGCPNTEIIAWMKNKSVICLNPGAKWTQKLMRVSRKSAFSTSPAPVFKKMIA*