Part of scaffold_3887 (Scaffold)

For more information consult the page for scaffold_3887 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMPRSS5 ENSTTRG00000002183 (Bottlenosed dolphin)

Gene Details

transmembrane protease, serine 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002046, Bottlenosed dolphin)

Protein Percentage 96.0%
cDNA percentage 97.63%
Ka/Ks Ratio 0.36297 (Ka = 0.0168, Ks = 0.0462)

TMPRSS5 ENSBTAG00000017650 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023479, Cow)

Protein Percentage 85.31%
cDNA percentage 88.89%
Ka/Ks Ratio 0.24668 (Ka = 0.076, Ks = 0.308)

TMPRSS5  (Minke Whale)

Gene Details

transmembrane protease, serine 5

External Links

Gene match (Identifier: BACU004008, Minke Whale)

Protein Percentage 93.16%
cDNA percentage 95.61%
Ka/Ks Ratio 0.56412 (Ka = 0.0392, Ks = 0.0694)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location:78920..69263   Strand:-
>bmy_22246
ATGCTGGATGGCCAAGCCCCCATGGAGGCTCAGTATGCAGAGGAGAGTCCAGGATCCTGGATCTTCAGAGCAGAGCCAGGAGACCCACTGCGGAGGCCCGAGGCCCAGCAGCAACCCATCTCTTGGGCAGGGCACTGGTGCACAGGGCAGCGCGGCTGGGCRGTGCTGGGAGCCCTGGTGTTGCTGGCTGGTGCGAGCATTGGCTCCTGGCTTCTAGCACTGTATCTGTGGCCGGCTGCCTCTCAGCCTGTTCCCGGGACCCTGCAGGATGAGGAGATGAGCTTGAACTGCTCGGAGGCCAGCGGTGAGGAAGCCCTGCTCCCCTCGCTTCCCAGAGCAGTGTCTTTCAGAATAAACACCGAGGACTTCTTGCTGGAAGTGCAGGTGAGGGCCCGGCCAGACTGGCTCCTGGTCTGCCAAGAGGGCTGGAGCTCTGCCCTGGGGGTACGGATCTGCCGGAGCCTTGGGCATCTCAGACTCACAGACCACAAGGCAGTGAACCTGTCTGACATCAGGCTCAACAGCTCCAGGCAGTTTGCTCAGCTGTCTCCTAGACTGGGAGGCCTCCCGGAGGAGGTGTGGCAGCCCAGGGACAGCTGTACTTCTGGTCAAATGGTTTCCCTCAGATGCTCTGAGTGTGGGACCAGGCCCCTGGCTTCCCAGATAGTGGGCGGGCAGGCGGTGGCTCCCGGGCGCTGGCCCTGGCAGGCCAGCGTGGCCCTGGGTGCCCGGCACACATGCGGGGGCTCCGTGCTGGCCCCGCACTGGGTGGTGACCGCGGCGCACTGCGTGCACAGGCAAGGCTGGGGGCTGCTGGGGGGAGGTTTCAGGCTGTCCCGCTGGTCCAGCTGGCGGGTCCATGCGGGGCTGGTCAGCCACAGCACGGTCAGGCCGCACCAGGGGGCTGTGGTGGAGCGGATCATCGCCCACCCTCTGTACAGTGCCCAGAGTCACGACTACGACGTGGCCCTCCTGCAGCTCCGGACCCCGCTCCACTTCTCAGGTGAGGCTGCGGTGAGAGGGGCGGCGCCGGGAGCGCGAGAGCCCCGCAGGTTCCTAAGACCCCCTTGTGCTGTGAACCCAACGTTCACTTCATTTGACTCCGTGGGCGCCGTGTGCCTGCCGGCTGAAGAGCAGGATTTTCCGAGGGGCTCGCAGTGCTGGGTGTCTGGCTGGGGCCACACTGACCCCAGCCACACCCACAGGTCGGACACGCTCCGGGACGCGGTGGTGCCCCTGCTCAGCACCCAGCTCTGCAACAGCTCTTGCGTGTACAGCGGGGCCCTCACGCCCCGCATGCTGTGTGCCGGCTACCTGGACCAGAGGGCCGACGCATGCCAGGGGGATAGCGGGGGTCCCCTGGTGTGCCTGGACAAGGGCACGTGGCGCCTGGTGGGGGTGGTCAGCTGGGGCCGCGGCTGCGCAGAGCCCAACCACCCCGGCGTCTACGCCAAGGTTGCCGAATTCCTGGACTGGATCCAGGACACGGCGCAGGTGAGTCGGGGGGCAGGTGGGGCAGACCCATTTGTGAAGGACCACTAA

Related Sequences

bmy_22246T0 Protein

Length: 514 aa      View alignments
>bmy_22246T0
MLDGQAPMEAQYAEESPGSWIFRAEPGDPLRRPEAQQQPISWAGHWCTGQRGWAVLGALVLLAGASIGSWLLALYLWPAASQPVPGTLQDEEMSLNCSEASGEEALLPSLPRAVSFRINTEDFLLEVQVRARPDWLLVCQEGWSSALGVRICRSLGHLRLTDHKAVNLSDIRLNSSRQFAQLSPRLGGLPEEVWQPRDSCTSGQMVSLRCSECGTRPLASQIVGGQAVAPGRWPWQASVALGARHTCGGSVLAPHWVVTAAHCVHRQGWGLLGGGFRLSRWSSWRVHAGLVSHSTVRPHQGAVVERIIAHPLYSAQSHDYDVALLQLRTPLHFSGEAAVRGAAPGAREPRRFLRPPCAVNPTFTSFDSVGAVCLPAEEQDFPRGSQCWVSGWGHTDPSHTHRSDTLRDAVVPLLSTQLCNSSCVYSGALTPRMLCAGYLDQRADACQGDSGGPLVCLDKGTWRLVGVVSWGRGCAEPNHPGVYAKVAEFLDWIQDTAQVSRGAGGADPFVKDH*