Part of scaffold_3821 (Scaffold)

For more information consult the page for scaffold_3821 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

T ENSTTRG00000016665 (Bottlenosed dolphin)

Gene Details

T, brachyury homolog (mouse)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015800, Bottlenosed dolphin)

Protein Percentage 96.99%
cDNA percentage 97.08%
Ka/Ks Ratio 0.15131 (Ka = 0.0134, Ks = 0.0888)

Gene Details

brachyury protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024865, Cow)

Protein Percentage 92.48%
cDNA percentage 91.98%
Ka/Ks Ratio 0.09635 (Ka = 0.0332, Ks = 0.3441)

T  (Minke Whale)

Gene Details

T, brachyury homolog (mouse)

External Links

Gene match (Identifier: BACU011726, Minke Whale)

Protein Percentage 98.75%
cDNA percentage 98.33%
Ka/Ks Ratio 0.09901 (Ka = 0.0056, Ks = 0.0562)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1260 bp    Location:8756..599   Strand:-
>bmy_22252
GGCGCGGGGAAGAGCCTGCAGTACCGCGTGGACCACCTGCTGAGCGCCGTGGAGAGCGAGTTGCAGGCGGGCAGCGAGAAGGGCGACCCCACGGAACGCGAGCTGCGCGTGGGCCTGGAGGAGAGCGAGCTGTGGCTGCGCTTCAAGGAGCTCACCAACGAGATGATCGTGACCAAGAACGGCAGGAGGATGTTCCCGGTGCTGAAGGTGAACGTGTCCGGCCTGGACCCCAACGCCATGTACTCCTTCCTGCTGGACTTTGTGGCGGCCGACAACCACCGCTGGAAGTACGTGAACGGGGAGTGGGTGCCAGGGGGCAAGCCTGAGCCGCAGGCGCCCAGCTGCGTCTACATCCATCCCGACTCGCCCAACTTCGGGGCGCACTGGATGAAGGCGCCGGTCTCCTTCAGCAAAGTCAAGCTCACCAACAAGCTCAATGGAGGGGGCCAGATCATGCTGAACTCCTTACATAAGTATGAGCCTCGAATCCACATCGTGAGAGTTGGGGGTCCGCAGCGCATGATCGCCAGCCACTGCTTCCCGGAGACCCAGTTCATAGCGGTGACCGCTTATCAGAATGAAGAGATCACAGCTCTTAAAATTAAATACAATCCATTTGCAAAAGCTTTCCTTGATGCAAAGGAAAGCACCCTGTGTCCACCTGCCACCCCTCACCCTCAGTTTGGAGGCCCCCTCTCTCTTCCCTCCACGCACGGCTGTGAAAGGTACCCGGCCCTGAGGAACCACCGCCCAGCCCCCTATCCCAGCCCTTACGCGCATCGGAACAATTCTCCAACCTATTCTGACAATACATCTACATGTTTGTCCATGCTCCCATCCCACGACAATTGGTCCAGCCTTGGAATGCCTGCCCACACCAGCATGCTCCCCATGAGTCCGAATACTGGTCCTCCTACAGGCTCTAGCTTATCTGGAGCCCCTTCCCGGGTCTCTGACTCGTCTGCTTCTCCGTTTTTCCATTTCAGTCAGTACCCCAGCCTGTGGTCCGTGAGCAACGGCACCATCACCCCCGGTGCCCAGACGGCAGGGATGTCCAACGGGCTGGGAGCCCAGTTCTTTCGAGGCTCTTCTGCCCACTCTGCCTCTCTCGCCCACCCAGTCTCGGCTCCCTCCTCCTCGGGATCCCCACTGTACGATGGGGCCTCCACGGCCACAGATATTGCCGACAGCCAGTACGATGCCTCCGCCCAAGCCCGCCTCCTAGCCTCGTGGACGCCCGTGTCACCTCCGTCCATGTGA

Related Sequences

bmy_22252T0 Protein

Length: 420 aa      View alignments
>bmy_22252T0
GAGKSLQYRVDHLLSAVESELQAGSEKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMIASHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKESTLCPPATPHPQFGGPLSLPSTHGCERYPALRNHRPAPYPSPYAHRNNSPTYSDNTSTCLSMLPSHDNWSSLGMPAHTSMLPMSPNTGPPTGSSLSGAPSRVSDSSASPFFHFSQYPSLWSVSNGTITPGAQTAGMSNGLGAQFFRGSSAHSASLAHPVSAPSSSGSPLYDGASTATDIADSQYDASAQARLLASWTPVSPPSM*