Part of scaffold_3811 (Scaffold)

For more information consult the page for scaffold_3811 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MEPE ENSTTRG00000003536 (Bottlenosed dolphin)

Gene Details

matrix extracellular phosphoglycoprotein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003311, Bottlenosed dolphin)

Protein Percentage 89.82%
cDNA percentage 93.94%
Ka/Ks Ratio 0.47763 (Ka = 0.0513, Ks = 0.1075)

MEPE ENSBTAG00000007568 (Cow)

Gene Details

matrix extracellular phosphoglycoprotein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009958, Cow)

Protein Percentage 76.01%
cDNA percentage 85.92%
Ka/Ks Ratio 0.54752 (Ka = 0.1367, Ks = 0.2497)

MEPE  (Minke Whale)

Gene Details

matrix extracellular phosphoglycoprotein

External Links

Gene match (Identifier: BACU010630, Minke Whale)

Protein Percentage 96.02%
cDNA percentage 97.74%
Ka/Ks Ratio 0.45561 (Ka = 0.0169, Ks = 0.0372)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1908 bp    Location:14146..4672   Strand:-
>bmy_22258
ATGCACACAACTGACTTTGCTCGATCGGGGCCACAGAGGCACGGGCTTAGGCGTGAGGAGGATGGCGTGGGCCCCGCTGACCCAGCTCATCCCACCAGCCGAGGACAAGCCTGTTTTGAGCGCCACATTCCGAAGAACAGCTGCAGTGGCATCTCCGACCATCTTCCAGTAAATGTGCTGTGTCAACACCAACCCAGTGACCACCGGTCAAGAGAGGATGCCAGTCTTCTTCACCCGAGGGAAACCATGCCGTCTCCATTTCAGGGTCACGTTCAAGGGCAGGAGAGCTGCCAAACATTGCAACCACAGGCTGAGAAAATGAAGCAAGACTCTGTGGAAGAACAGAGGATAATGTACAAGGGCCACCATGAGAAACATGGGTATTATGTTTTTAAGTACGTTTATACCTCGTCTGGGAGGAAAAATCAAACTGATGTGAAGGAAGAAAAAAACAAAGACAATATTGCTCTTCCCCATTCTGGCAAGAGAAGAAATCAAGAGCCAGCACCTAAAGAAAACATTGTCCAAGAAAAAGAGAAAGACTTGTCCCTCCCTGGAACCAATGAAAATAACAAAAGCACTAAATCTCAAAGTCTTTTGGAAAATAGACAGACAATGAAGAAAGACTACAGGATTAGTAACAAAGAAAATGCCCACAATGACCTGAAGATGTCCATTTCTCCTGAATCGACTGGGAATCACGGGACTGAGGATGGAGACAATGCTGGTAGCAAACTACATGACCAAGAAGAATATGGCAAAGCTCTCATCAGAAATAACATGCACCACATAATGGAGCCAGGGGCTGTGACTGAACTCTTGAGGGAAGAAATCAAAGAGAACAAACCCCGGAATGTTTTAAGCAAAGTTCCAGCAGGTGCCAATTATGCTAAAGCCCCCTCAAAAATTAAGAAGAATCATCAAAGAGATTCGCAAGCCCAGAATATTCCAGTAAAAAGCAAAAGTACCCACCGTATCCAACACAACATGGACTATCTAAAACAGCTCCCCAAAGTCAAAAAGGTCTCCAGTGATTTTGAAGGCAGTGGTTATCCAGACCTTCAAGGGCAGGAGGACAATGATATCTCTCCTTTCAGTGGAGATGGTACACCTTTTAAGGACATTTCTGGTAAAGGAGATGCTATTCGTCCTGATCGAGAAGGTGCAGATATTCAAACAGAGTTTTCCAGCCCAAGTGAAGCTGAGACCATTAATCCTGACGCAAGAGGACCAGGTTATAATGAGATCCCAGAGAAAGAAGGGAATGGTGGAAATACCATTGGAACCAGGGATGAAACAGCCCAAAAGGCAAATGCTGCTGATGTAAGCCTAGTGGAGGGCAGCAACAACATCATAGGTAGCACCAATTTTAAGAAACTCTCTGGAAAAGAAGGAAGCAGAGTGGATGGCGGCAGCCAAAATGCTCATCAAGGGAAAATAGAGTTTCATTACCCTCACGCACCCACAGAAGACAAAAGAAAAGATGGCAGTAGTGATGGAGCTGAAAGTACTAATGAAATTCCGAAAAATGGCAAAGGTAGTAGTAGAAAAGATACAGAACATTCTAATAKGAATCAAGCGACCTCAAATGAAAAACAAAGATTTCCTAGTACGGGCAAAGGTCAGGGCCAGTTCATTCCTTCTCGTGGTYTTGATAATGAAATTAAAAATGAAATAGGTTCCCATAATGGTCCCAATAATGAAGGGACCATAATAACACACAGCAGGAAAAATTATTATGTGCCCCACAGACAAAATAATTCTATGCAGAACAAGGGTGTGTCACAAAGCAAAGGTTCCTGGGGTTACAGAAAGCCCCATTCCAATAGGAGGTTTCGCCCCCCTAAAAAGCATGACAGTAGTGAATCATCTGACAGTGGCAGTTCCAGTGACAGCGATGGTGACTAG

Related Sequences

bmy_22258T0 Protein

Length: 636 aa      View alignments
>bmy_22258T0
MHTTDFARSGPQRHGLRREEDGVGPADPAHPTSRGQACFERHIPKNSCSGISDHLPVNVLCQHQPSDHRSREDASLLHPRETMPSPFQGHVQGQESCQTLQPQAEKMKQDSVEEQRIMYKGHHEKHGYYVFKYVYTSSGRKNQTDVKEEKNKDNIALPHSGKRRNQEPAPKENIVQEKEKDLSLPGTNENNKSTKSQSLLENRQTMKKDYRISNKENAHNDLKMSISPESTGNHGTEDGDNAGSKLHDQEEYGKALIRNNMHHIMEPGAVTELLREEIKENKPRNVLSKVPAGANYAKAPSKIKKNHQRDSQAQNIPVKSKSTHRIQHNMDYLKQLPKVKKVSSDFEGSGYPDLQGQEDNDISPFSGDGTPFKDISGKGDAIRPDREGADIQTEFSSPSEAETINPDARGPGYNEIPEKEGNGGNTIGTRDETAQKANAADVSLVEGSNNIIGSTNFKKLSGKEGSRVDGGSQNAHQGKIEFHYPHAPTEDKRKDGSSDGAESTNEIPKNGKGSSRKDTEHSNXNQATSNEKQRFPSTGKGQGQFIPSRGXDNEIKNEIGSHNGPNNEGTIITHSRKNYYVPHRQNNSMQNKGVSQSKGSWGYRKPHSNRRFRPPKKHDSSESSDSGSSSDSDGD*