Part of scaffold_3886 (Scaffold)

For more information consult the page for scaffold_3886 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BRD1 ENSTTRG00000013875 (Bottlenosed dolphin)

Gene Details

bromodomain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013157, Bottlenosed dolphin)

Protein Percentage 92.13%
cDNA percentage 94.21%
Ka/Ks Ratio 0.29522 (Ka = 0.0427, Ks = 0.1447)

BRD1 ENSBTAG00000046760 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055298, Cow)

Protein Percentage 87.02%
cDNA percentage 87.89%
Ka/Ks Ratio 0.17485 (Ka = 0.0763, Ks = 0.4365)

BRD1  (Minke Whale)

Gene Details

bromodomain containing 1

External Links

Gene match (Identifier: BACU013495, Minke Whale)

Protein Percentage 94.13%
cDNA percentage 94.62%
Ka/Ks Ratio 0.26544 (Ka = 0.0363, Ks = 0.1369)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2211 bp    Location:18967..41241   Strand:+
>bmy_22272
ATGAGGAGGAAAGGCCGAGGTCATCGCGCTGCAGCGAGGCACCCTTCCTCCCCCGGCAGCACTAAGCACTCCCCCACGCGAGAGACGCTGACCTACGCGCAAGCGCAGAGGATGGTGGAGATCGAGATCGAGGGCCGCCTGCACAGGATCAGTATCTTCGACCCTCTGGAGATCATATTAGAAGATGACCTCACTGCTCAGGAGATGAGCGAGTGCAACAGCAACAAAGAGAACAGCGAGAGGCCGCCCGTGTGCTTAAGAACTAAGCGGCACAAGAACAACAGGGTCAAGAAGAAAAATGAAGCCCCGCCCGGCGCCCACGGCGCCCCCGCCTCGACCGGCACGCTCCCCGAGCCCACGGTGCGCGTGGTGGAGTACAGCCCCCCGGCGGCGCCCCGGCGGCCGCCCGCGTACTACAAGTTCGTGGAGAAGTCGGCCGCGGAGCTGGACCACGAGGTGGAGTACGACATGGACGAGGAGGACTACGCCTGGCTGGAGATCGTCAACGAGCGGCGCAGGGGCGACTGCGTGGCCGCCGTGTCGCAGAGCGTGTTCGAGTTCCTGATGGACCGCTTCGAGAAGGCGTCGCACTGCGAGAAGCAGAAGCAGGGCGGGCAGCAGCCCCTGAACATTTACGGGGACGTCGAGGTGAAAAACGGCGTCTGCTGGAAGGAGAGCTCAGCCAAAACGGTCAGGTCCACGTCCAAGGTCAGGAAGAAAGCGAAGAAGGCCAAGAAGACGCTCCGGGAGCCCTGTGCGGCCCTGCCGCCTGTGTGTGCGCCCTACATTCCCCCTCAGAGATTAAACAGGATTGCGAATCAGGTGGCCATTCAGCGGAAGAAGCAGTTTGTCGCACGCGCCCACAGCTACTGGCTCCTCAAAAGGCTGTCGAGGAACGGGGCCCCCCTGCTGCGCAGACTGCAGTCCAGCCTGCAGTCCCACAGGAGCTCGCAGCAGAGAGAAAACGACGAGGAGATTCAAGCTGCCAAAGAGAAGCTGAAGTACTGGCAGCGGCTGCGGCACGACCTGGAGCGCGCGCGCCTGCTCATTGAGCTCCTGCGCAAGCGCGAGAAGCTCAAGCGGGAGCAGGTGAAGGTGGAGCAGATGGCCCTGGAGCTGCGGCTGACCCCGCTCACCGTGCTGCTGCGCTCCGTGCTGGACCAGCTGCAGGAGAAGGACCCGGCCCGGATATTTGCCCAGCCAGTGAGCCTGAAGGAGGTTCCGGATTATCTGGATCACATTAAACACCCTATGGACTTTGCCACGATGCGGAAACGGTTAGAAGCGCAAGGGTACCGGACTCTCAGGGAGTTGGAGGAGGACTTTGACCTCATCGTGGACAACTGCATGAAGTACAACGCCAAGGACACGGTGTTCTACCGGGCCGCCGTGCGGCTGCGTGACCAGGGTGGCGTGGTGCTCAGGCAGGCCAGGCGCCAGGCAGACAGCGTTGGCTTCGAGGAGGCCTCAGGGATGCACCTGCCCGAGCGGCCCCCCGCGGCCCCCCGGCGGCCTTTCTCCTGGGACGACGTGGACAGGTTGCTGAACCCGGCCAACAGGGCCCACCTGGTCCTGGAGGAGCAGCTGAGGGAGCTGCTGGACATGCTGGACCTCACGTGCTCCATGAAGTCCAGCGGGTCGCGGAGCAAGCGAGCCAAGTTGCTGAAGAAGGAGATCGCCGTTCTTCGGAACAAGCTGAGCCAGCAGCACAGCCAGCCCCCGGCCGCCGAGTCAGGTACTGCAGGCTTTGAAGAGGACGGTGCTCAGCTGGGGCAGGAGACCGGGGAGGAAGGAGATAAATCTCCCCCTAAACTTGAACCATCAGATGCATTACCTCTTCCTTCAAACTCGGAGACTAATTCAGAACCACCAACCCTCAAACCAGTAGAACTCAACCCAGAGCAGAGTAAACTATTCAAAAGAGTCACATTTGGTAATGAATCACATAGCACTTGCACTCAGAGCGCACTGGTAATCGGACACCCTCCAGAGCCCACCCTCGCCAGTAGTGGCGATGCGCCGGCGGCGGCCTCCGCGGTGGCGGAGCCATCAAGCGATGTAAACAGACGCACTTCTGTTCTCTTCTGCAAATCGAAAAGTTCCTTCCGAGGTTGGAGACTCTTCTGCAGCCAAGAAAAAGGTCGCGAAGCACCTGCGGCGACTCCGAGGTGGAGGAGGGGTCCCCGGGAAAGCGCCTGGACACAGGTAAAT

Related Sequences

bmy_22272T0 Protein

Length: 737 aa      View alignments
>bmy_22272T0
MRRKGRGHRAAARHPSSPGSTKHSPTRETLTYAQAQRMVEIEIEGRLHRISIFDPLEIILEDDLTAQEMSECNSNKENSERPPVCLRTKRHKNNRVKKKNEAPPGAHGAPASTGTLPEPTVRVVEYSPPAAPRRPPAYYKFVEKSAAELDHEVEYDMDEEDYAWLEIVNERRRGDCVAAVSQSVFEFLMDRFEKASHCEKQKQGGQQPLNIYGDVEVKNGVCWKESSAKTVRSTSKVRKKAKKAKKTLREPCAALPPVCAPYIPPQRLNRIANQVAIQRKKQFVARAHSYWLLKRLSRNGAPLLRRLQSSLQSHRSSQQRENDEEIQAAKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQMALELRLTPLTVLLRSVLDQLQEKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYRTLRELEEDFDLIVDNCMKYNAKDTVFYRAAVRLRDQGGVVLRQARRQADSVGFEEASGMHLPERPPAAPRRPFSWDDVDRLLNPANRAHLVLEEQLRELLDMLDLTCSMKSSGSRSKRAKLLKKEIAVLRNKLSQQHSQPPAAESGTAGFEEDGAQLGQETGEEGDKSPPKLEPSDALPLPSNSETNSEPPTLKPVELNPEQSKLFKRVTFGNESHSTCTQSALVIGHPPEPTLASSGDAPAAASAVAEPSSDVNRRTSVLFCKSKSSFRGWRLFCSQEKGREAPAATPRWRRGPRESAWTQVN