Part of scaffold_3883 (Scaffold)

For more information consult the page for scaffold_3883 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RER1 ENSTTRG00000003753 (Bottlenosed dolphin)

Gene Details

RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003523, Bottlenosed dolphin)

Protein Percentage 70.92%
cDNA percentage 71.09%
Ka/Ks Ratio 0.28364 (Ka = 0.053, Ks = 0.1868)

RER1 ENSBTAG00000009307 (Cow)

Gene Details

Protein RER1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012259, Cow)

Protein Percentage 98.47%
cDNA percentage 92.18%
Ka/Ks Ratio 0.01331 (Ka = 0.0065, Ks = 0.4905)

RER1  (Minke Whale)

Gene Details

retention in endoplasmic reticulum sorting receptor 1

External Links

Gene match (Identifier: BACU015427, Minke Whale)

Protein Percentage 88.72%
cDNA percentage 92.65%
Ka/Ks Ratio 0.30309 (Ka = 0.0534, Ks = 0.176)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 756 bp    Location:65477..57753   Strand:-
>bmy_22294
ATGGGGCAGCTCGGGCCGTCGGGAGCCGCGGTTTTCTGTCTGAATGGGAAGGGCTGCTGTGCCAGCAGCATGTCCGAAGGTGACAGTGTGGGAGATTCCGTCCACGGGAAGCCTTCTGTGGTGTACAGGTTCTTCACAAGGCTCGGACAGATCTATCAGTCCTGGCTGGACAAGTCTACGCCATACACGGCTGTGCGATGGGTGGTGACGCTGGGCCTGAGCTTCGTCTACATGATTCGAGTTTACCTTCTGCAGGGTTGGTACATCGTGACCTACGCCTTGGGAATCTACCATCTAAATCTCTTCATAGCTTTCCTTTCTCCAAAAGTGGATCCTTCCTTAATGGAAGATTCAGGTCCCTTTCTCACAAAAGCAGGCTTCCACGGCGGCTTCGCGTGGCTGACTGAGGCCACTGGCCCCCCGATGTCCCCTGAGGGCGATGGGTTGAAAGACGATGGCCCCTCGTTACCGACCAAACAGAACGAGGAGTTCCGGCCCTTCATTCGGAGGCTCCCAGAGTTTAAGTTTTGGCACGCAGCGACCAAGGGCATCCTGGTGGCCACGGTCTGCACCTTCTTTGAGGCATTCAACGTCCCGGTGTTCTGGCCCATCCTGGTGATGTACTTCATCATGCTTTTCTGTATCACGATGAAGAGGCAAATAAAGCACATGATCAAGTACCGGTACATCCCGTTCACGCATGGCAAGAGGACGTACAAGGGGAAGGAGGACGCGGGCAAGACGTTCGCCAGCTAG

Related Sequences

bmy_22294T0 Protein

Length: 252 aa      View alignments
>bmy_22294T0
MGQLGPSGAAVFCLNGKGCCASSMSEGDSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSGPFLTKAGFHGGFAWLTEATGPPMSPEGDGLKDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVATVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTYKGKEDAGKTFAS*