Sequence details bmy_22392 (Coding sequence)

Part of scaffold_4097 (Scaffold)

For more information consult the page for scaffold_4097 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTR9 ENSTTRG00000012321 (Bottlenosed dolphin)

Gene Details

CTR9, Paf1/RNA polymerase II complex component

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011691, Bottlenosed dolphin)

Protein Percentage 95.61%
cDNA percentage 95.18%
Ka/Ks Ratio 0.15008 (Ka = 0.0056, Ks = 0.0373)

CTR9 ENSBTAG00000015566 (Cow)

Gene Details

RNA polymerase-associated protein CTR9 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035273, Cow)

Protein Percentage 95.42%
cDNA percentage 92.79%
Ka/Ks Ratio 0.11652 (Ka = 0.0309, Ks = 0.2651)

CTR9  (Minke Whale)

Gene Details

CTR9, Paf1/RNA polymerase II complex component

External Links

Gene match (Identifier: BACU005656, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.21%
Ka/Ks Ratio 0.0915 (Ka = 0.0018, Ks = 0.0196)

Additional orthologs identified in other species via the OPTIC pipeline.

CTR9 (Human)   Ctr9 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3291 bp    Location:25275..388   Strand:-
Raw sequence 
>bmy_22392
ATGTCGCGGGGCTCCATTGAGATTCCCCTCCGGGACACTGACGAGGTCATTGAACTTGACTTCGATCAGTTACCGGAGGGAGATGAAGTTATCAGTATTCTGAAACAGGAACACACACAACTGCATATATGGATTGCTTTGGCGAACCATTTGTTGGGAAGAGCCTGCTTCTGCCTACTTGAAGGTGACAAAATGGATCAGGCTGATGCACAATTTCATTTCGTACTCAACCAGTCTCCAAATAATATTCCAGCCCTTCTTGGTAAAGCTTGCATTTCATTCAACAAGAAGGATTACAGAGGAGCTCTTGCTTACTATAAGAAAGCCTTGCGAACTAACCCGGGATGTCCAGCGGAAGTTCGTTTAGGAATGGGCCATTGCTTTGTGAAACTTAACAAATTGGAGAAGGCTCGTCTGGCGTTCAGCAGAGCCCTGGAACTCAATTCCAAATGTGTGGGAGCATTGGTGGGACTGGCTGTTCTAGAACTCAACAATAAAGAGGCTGATTCCATCAAAAATGGTGTCCAACTTCTTTCCAGAGCCTATACTATTGATCCTAGCAACCCTATGGTATTGAACCACTTGGCAAATCACTTTTTCTTCAAAAAGGATTACAGTAAAGTCCAGCACTTGGCTCTCCATGCATTCCATAATACAGAAGTGGAGGCCATGCAAGCAGAAAGTTGCTATCAGTTGGCTAGATCATTCCATGTCCAGGAAGATTATGACCAAGCTTTCCAGTACTACTATCAAGCCACACAGTTTGCCTCATCCTCTTTTGTGCTGCCTTTTTTTGGTTTGGGACAAATGTACATTTATCGAGGTGACAAAGAGAATGCATCTCAGTGCTTTGAGAAAGTTTTGAAAGCTTATCCTAATAATTATGAAACTATGAAAATTCTTGGCTCTCTATATGCCGCCTCAGAAGACCAAGAAAAACGAGATATTGCCAAGGGCCATTTGAAGAAGGTCACAGAACAGTATCCTGATGACGTTGAAGCTTGGATTGAGTTGGCACAGATCTTAGAACAGACCGATATACAGGGTGCCCTGTCAGCCTACGGAACAGCGACACGGATCCTTCAGGAGAAAGTGCAGGCCGATGTCCCCCCAGAGATTCTGAATAACGTGGGTGCCCTCCATTTCAGACTTGGAAATCTGGGAGAGGCAAAGAAATACTTTCTGGCATCATTGGATCGTGCAAAGGCAGAAGCTGAGCATGATGAACATTATTACAATGCCATTTCTGTTACAACGTCATACAATTTAGCCAGGCTGTATGAGGCGATGTGTGAATTCCATGAAGCAGAAAAACTATATAAAAACATCTTACGGGAACATCCTAATTATGTTGACTGCTATCTGCGCCTAGGAGCCATGGCTAGAGATAAAGGAAATTTTTATGAGGCTTCAGATTGGTTTAAGGAAGCTCTTCAGATTAATCAGGACCATCCGGATGCTTGGTCTTTGATTGGTAATCTTCATTTGGCAAAACAAGAATGGGGTCCAGGCCAGAAGAAATTCGAGAGGATATTAAAACAACCAGCTACTCAGAGTGACACTTATTCTATGCTGGCCCTTGGCAACGTCTGGCTCCAAACTTTGCATCAGCCCACCCGAGATAGAGAAAAGGAAAAGCGTCATCAAGATCGTGCTCTGGCCATCTACAAACAAGTACTCAGAAATGATGCAAAGAATCTGTATGCTGCTAATGGCATAGGAGCTGTTTTGGCCCACAAAGGATATTTCCGTGAAGCTCGTGATGTATTTGCCCAAGTAAGAGAAGCAACGGCAGATATCAGTGATGTGTGGTTGAACCTAGCACACATCTACGTGGAACAAAAGCAATATATCAGCGCCGTTCAGATGTATGAAAACTGCCTCAGAAAGTTCTATAAGCACCAGAACACTGAAGTTGTGCTCTATTTGGCCCGGGCCCTCTTCAAGTGTGGCAAGTTACAAGAATGCAAACAGACTCTGCTGAAGGCTAGACACGTGGCACCCAGTGATACAGTTCTCATGTTTAATGTGGCCTTGGTCCTGCAAAGATTAGCTACCTCTGTCCTGAAAGATGAAAAGAGTAACCTGAAGGAAGTACTCAATGCTGTGAAAGAACTGGAGCTTGCACACAGATATTTCAGTTACTTGAGTAAAGTTGGAGATAAAATGAGATTTGATTTGGCCCTCGCTGCTACAGAAGCCAGGCAATGCTCTGACTTACTGAGCCAGGCCCAGTACCACGTGGCCAGGGCACGCAAACAGGACGAAGAAGAAAGGGAATTGCGGGCCAAACAAGAACAAGAGAAAGAACTGTTAAGGCAGAAACTTCTCAAAGAACAGGAAGAGAAACGTCTCAGAGAAAAAGAAGAGCAAAAGAAACTTTTGGAACAGCGGGCCCAGTACGTAGAGAAGACCAAAAATATTCTTATGTTTACTGGAGAGACTGAAGCAACAAAAGAAAAGAAAAGAGGTGGCAGTGGTGGACGGCGGTCCAAGAAGGGAGGAGAGTTTGATGAGTTTGTCAACGATGACACCGATGAAGACCTGCCTATATCCAAAAAGAAGAAGAGAAGGAAGGGCAGTGGTAGTGAGCAAGAAGGCGAGGAGGAGGAGGGTGGCGAGAGAAAGAAGAAGAAGAGGAGAAGACCTCCGAAGGGAGATGAAGGATCTGATGACGATGAAACAGAAAATGGCCCCAAACCGAAAAAGCGCCGTCTACCAAGAGCAGAGAAGAAGAAGGCTCCCAAGCCGGAACGTCTGCCTCCTTCAATGAAGGGAAAAATAAAATCCAAAGCCATAATATCATCAAGTGACGATTCATCTGATGAAGATAAACTGAAAATTGCTGATGAAGGACATCCCCGCAACAGCGACAGCGACTCCGACGAGGGCCAGCGGCGGAAGACGGGTGCCTCCTCGGAGGAGAGCGACTCCGACGAGAACCAGAACAAGTCCGGCAGCGAGGCCGGCAGCCCCCGGCGGCCCCGGAGGCAGCACTCGGATGAGGACTCAGACAGCGACCAGCCGGCCAGAAAGCGCAGGCCCTCGGGCTCCGAACAGTCTGACAACGAATCCCTGCAGTCYGGGCGGAGCCGCTCGGGGGGCTCTGAGATGGACTCTCGGCCTGCATCCCCCAGCGCCGAGTCGGACCGCTACTCCGAGAGAGCATCCGACAACGAGGGGTCCGTCCGAGGCTCCGGCAGAGGCTCCGGCAATGAATCCGAACCCGAGGGATCCAACAACGAGGCCTCGGATCAGGGCTCAGAACGTGGTTCRGATGATAGCGACTAG

Related Sequences

bmy_22392T0 Protein

Length: 1097 aa      View alignments
>bmy_22392T0
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALANHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKEKKRGGSGGRRSKKGGEFDEFVNDDTDEDLPISKKKKRRKGSGSEQEGEEEEGGERKKKKRRRPPKGDEGSDDDETENGPKPKKRRLPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADEGHPRNSDSDSDEGQRRKTGASSEESDSDENQNKSGSEAGSPRRPRRQHSDEDSDSDQPARKRRPSGSEQSDNESLQSGRSRSGGSEMDSRPASPSAESDRYSERASDNEGSVRGSGRGSGNESEPEGSNNEASDQGSERGSDDSD*