Sequence details bmy_22424 (Coding sequence)

Part of scaffold_4093 (Scaffold)

For more information consult the page for scaffold_4093 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC1A6 ENSTTRG00000014526 (Bottlenosed dolphin)

Gene Details

solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013773, Bottlenosed dolphin)

Protein Percentage 91.58%
cDNA percentage 92.02%
Ka/Ks Ratio 0.2164 (Ka = 0.0088, Ks = 0.0409)

SLC1A6 ENSBTAG00000013502 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017953, Cow)

Protein Percentage 98.16%
cDNA percentage 93.77%
Ka/Ks Ratio 0.03085 (Ka = 0.0085, Ks = 0.2766)

SLC1A6  (Minke Whale)

Gene Details

solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6

External Links

Gene match (Identifier: BACU004868, Minke Whale)

Protein Percentage 99.74%
cDNA percentage 99.39%
Ka/Ks Ratio 0.07285 (Ka = 0.0012, Ks = 0.017)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC1A6 (Human)   Slc1a6 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1143 bp    Location:18955..7303   Strand:-
Raw sequence 
>bmy_22424
ATGTTTCCGCCCAACCTTGTGGAGGCCTGCTTCAAACAGTTTAAGACGCAGTACAGCACGAGGTTGGTAACCAGGACCATTGTGAGGACAGATAATGGATCTGAGCTGGGCACCTCCATGCCTCCTTTATCCTCAATGGAGAACGGAAGCAGCCTCTTGGAAAATGTCACACGGGCCATGGGCACCTTGCAGGAGGTGCTGAGCTTTGAGGAGACTGTGCCTGTGCCTGGCTCAGCCAATGGCATCAACGCCCTGGGCCTTGTGGTCTTCTCGGTGGCCTTTGGGCTGGTCATCGGTGGCATGAAACACAAGGGCCGAGTCCTGCGGGATTTCTTCGACAGCCTCAATGAGGCTATTATGAGGCTGGTGGGCATCATTATCTGGTATGCACCTGTGGGCATCTTGTTCCTGATTGCTGGCAAGATCCTAGAGATGGAAGACATGGCCGTCCTGGGGGGTCAGCTGGGCATGTACACCCTGACCGTCATCGTGGGTTTGTTCCTTCATGCCGGTGGCATCCTGCCTCTCATCTACTTCCTCATCACCCATCGGAATCCTTTCCCCTTCATTGGGGGAATACTGCAGGCCCTCATCACTGCCATGGGCACGTCTTCCAGCTCGGCGACACTGCCCATCACCTTCCGCTGTCTGGAGGAGGGCCTGGGTGTGGACCGCCGCATCACCAGGTTTGTGCTGCCTGTGGGGGCCACCGTCAACATGGATGGCACTGCCCTCTATGAGGCCCTGGCCGCCATCTTCATCGCTCAAGTCAACAACTACGAGCTCAACCTGGGTCAGATCACAACTATCAGTATCACGGCTACAGCWGCCAGCGTTGGGGCTGCTGGCATCCCCCAGGCAGGTCTGGTCACCATGGTCATTGTGCTCACGTCGGTTGGCCTGCCCACTGAAGACATCACGCTCATCATAGCTGTGGACTGGTTCCTTGATCGACTTCGCACCGTGACCAATGTGCTGGGGGACTCTATTGGAGCAGCCGTCATTGAGCATTTGTCTCAGCGGGAGCTGGAGCTGCAGGAAGCTGAACTCACCCTCCCCAGCCTGGGGAAGCCCTACAAGTCTCTCATGGCACAAGAGAAGGGGGCGTCCAGGGGACGGGGAGGCAACGAGAGTGCCATGTGA

Related Sequences

bmy_22424T0 Protein

Length: 381 aa      View alignments
>bmy_22424T0
MFPPNLVEACFKQFKTQYSTRLVTRTIVRTDNGSELGTSMPPLSSMENGSSLLENVTRAMGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLNEAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGILPLIYFLITHRNPFPFIGGILQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTVTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLGKPYKSLMAQEKGASRGRGGNESAM*