Part of scaffold_4131 (Scaffold)

For more information consult the page for scaffold_4131 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MYSM1 ENSTTRG00000005999 (Bottlenosed dolphin)

Gene Details

Myb-like, SWIRM and MPN domains 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005675, Bottlenosed dolphin)

Protein Percentage 67.97%
cDNA percentage 68.25%
Ka/Ks Ratio 0.29039 (Ka = 0.0076, Ks = 0.0261)

MYSM1 ENSBTAG00000013961 (Cow)

Gene Details

histone H2A deubiquitinase MYSM1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033239, Cow)

Protein Percentage 93.32%
cDNA percentage 94.61%
Ka/Ks Ratio 0.22615 (Ka = 0.0317, Ks = 0.1401)

MYSM1  (Minke Whale)

Gene Details

Myb-like, SWIRM and MPN domains 1

External Links

Gene match (Identifier: BACU000219, Minke Whale)

Protein Percentage 90.52%
cDNA percentage 92.0%
Ka/Ks Ratio 0.42919 (Ka = 0.0683, Ks = 0.1592)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2535 bp    Location:16624..56081   Strand:+
>bmy_22438
ATGGCGGCTGAAGAGGCGGATGTGGATATCGAAGGGGACGTGGTGCCAGCGGCGGCACCGTCTGGAAGTGATGAAAATACAGCATCTGTTTTACAAGACCACTATCTTGACTCATCGTGGAGAACTGAGAATGGTCTTATTCCTTGGACTCTGGATAGCACCATCAGTGAAGAGAACAGAGCTGTCATTGAGAAAATGTTGTTGGAAGAAGAGTATTATTTATCCAAAAAGTCACTTCCAGGAAAATTCTGGCTTGATCAAAAGGAAGATGATAAAAAATACATGAAGAGGGTACACTCTCCTACAAAACCAGCCAGTTACTCAGTAAAGTGGACGATAGAAGAAAAAGAGCTGTTTGAACAAGGGCTGAAGTCAAGATTTGAAAAGAAGAATGTGGGCTTTGATTTTAGGAGTCTTAACTATATTGCTAAATTTGGCCGAAGGTGGACCAAAATTGCAAAGCTAATTGGAAGTCGCACTGTTTTACAAGTGAAGAGTTATGCCAGACAGTACTTTAAAAATAAGGTAAAATCAGATGGTCCAGAGAAGGAAACACCAAATCAGAAAAACAGCAGTGGTTTTCAGACGAAAAATGAAGATGAAGGCACAAAGGCATGGACACCATCAGGTTTAAGGGGTCGTGCTGATCCCAACTGGAATGCTGTAAAAATTGAAAAGTTATCTGATGATGAAGAAGTAGACATCACAGATGAGGCAGATGAGTTGACTTCTCAAGCTCCCCAAAAGAATCTTAGCAGTGATCTCTTATTAGATGTCTCTAAAAATAAAAGTCATGAAACCAGTAAAGGAGAATTCATTGCTTCTGACAGCCAGGAAGATCCCATTTCTAAATCTTCCAAGGATTATCTTCAGAATATAAAGCAAGGTGAGATGGAAACACTTTCAAGCTCAGGAAATACATTTTGGACTGAAAATCACAACACCAGTGACCAAAAATCAGTTGAATTATATGATCAGAAATGTAATAAACTGATGAAAAACTGTAATAAGCATGATGGAAATGGAATAATAGATGATGCCAGGCAGTTACCTTCTCCAGAGCCTTGTGAAGTTCAGAAAGACTTGAGTGATAATGAATTGCTTTTTCATTCTTCCTGCCAAATGGAGGAGGAGAGCCATGAGGAAGAAGAGCTTAAGCCACCAGAACAAGAAATAGAAATTGATAGAAATATCATTCAAGAGGAAGAAAAACAAGCAATTCCTGAGTTTTTTGAGGGACGCCAAGCTAAAACACCAGAACGCTATTTGAAAATTAGGAATTATATTTTGGACCAGTGGGAGATATGCAAACCGAAATACTTAAATAAGACCTCAGTACGTCCTGGCCTGAAGAACTGTGGGGATGTTAATTGTATTGGACGGATTCATACATACCTCGAGTTGATAGGAGCAATCAATTTTGGATGTGAACAGGCTGTATATAACAGGCCACAGCCAGTTGATAAAGTACGAATCAGAGACAGAAAAGACACAGTAGAAGCGTACCAACTTGCCCAGCGTCTGCAGTCTATGCGTACAAGGAGACGTAGGGTCCGAGACCCGTGGGGAAATTGGTGTGATGCAAAAGACTTAGAAGGACAAACGTTTGAGCATCTCTCTGCTGAGGAGTTGGCAAGAAGAAGAGAAGAGGAAAAATGCAAACCTGGTAAATCTTCAAAAGTGCCAAGGCCAACAAAAAGCTCATTCGATCCCTTCCAACTGATACCTTGTAATTTTTTCAGTGAAGAAAAGCAGGAGCCATTTCAGGTGAAAGTGGCTTCAGAAGCACTTTTAATAATGGATTTGCATGCTCATGTTTCTATGGCAGAAGTGATTGGTCTGTTAGGAGGAAGATACTCAGAAGTTGATAAGATAGTTGAGGTCTGTGCAGCAGAGCCATGTAACAGTCTGAGTACAGGACTACAGTGTGAGATGGATCCCGTCTCACAAACACAAGCCTCGGAAACCTTGGCTGTCAGGGGCTATAGTGTTATTGGATGGTATCATTCTCATCCTGCCTTTGATCCTAATCCTTCCTTACGAGATATTGACACTCAAGCCAAATACCAGAGTTACTTCTCCAGAGGCGGTGCAAAGTTCATTGGAATGATTGTTAGTCCTTATAATAGAAATAATCCTTTACCTTATTCTCAGATTACCTGCCTGGTTATAAGTGATGAAATTAGCCCAGATGGCTCTTATCGTTTACCTTATAAATTTGAAGTACAACAGATGTTAGAAGAACCTCGGTGGGGATTAGTGTTTGAAAAGACAAAGTGGATAATAGAAAAATATGGGCTATCCCGGAGCAGTGTCCCCATGGATAAAATCTTTCGCCGGGATTCTGACCTGACTTGTTTGCAGAAACTTTTAGAGTGTCTGAGGAAAACTCTGAGCAAAGTGGCCAATTGCTTCATTGCTGAAGAATTCTTGACTCAAATAGAAAATTTATTCCTTTCCAATTACAAAAGCCAGCCAGAGAACGGAGCGGCCGAAGAGAAGTGCACCGTGGAGCCAAAGGCGCTGTTAACGTGA

Related Sequences

bmy_22438T0 Protein

Length: 845 aa      View alignments
>bmy_22438T0
MAAEEADVDIEGDVVPAAAPSGSDENTASVLQDHYLDSSWRTENGLIPWTLDSTISEENRAVIEKMLLEEEYYLSKKSLPGKFWLDQKEDDKKYMKRVHSPTKPASYSVKWTIEEKELFEQGLKSRFEKKNVGFDFRSLNYIAKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKVKSDGPEKETPNQKNSSGFQTKNEDEGTKAWTPSGLRGRADPNWNAVKIEKLSDDEEVDITDEADELTSQAPQKNLSSDLLLDVSKNKSHETSKGEFIASDSQEDPISKSSKDYLQNIKQGEMETLSSSGNTFWTENHNTSDQKSVELYDQKCNKLMKNCNKHDGNGIIDDARQLPSPEPCEVQKDLSDNELLFHSSCQMEEESHEEEELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAVYNRPQPVDKVRIRDRKDTVEAYQLAQRLQSMRTRRRRVRDPWGNWCDAKDLEGQTFEHLSAEELARRREEEKCKPGKSSKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMAEVIGLLGGRYSEVDKIVEVCAAEPCNSLSTGLQCEMDPVSQTQASETLAVRGYSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISDEISPDGSYRLPYKFEVQQMLEEPRWGLVFEKTKWIIEKYGLSRSSVPMDKIFRRDSDLTCLQKLLECLRKTLSKVANCFIAEEFLTQIENLFLSNYKSQPENGAAEEKCTVEPKALLT*