Part of scaffold_4140 (Scaffold)

For more information consult the page for scaffold_4140 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PGBD2 ENSTTRG00000006382 (Bottlenosed dolphin)

Gene Details

piggyBac transposable element derived 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006033, Bottlenosed dolphin)

Protein Percentage 98.99%
cDNA percentage 98.76%
Ka/Ks Ratio 0.16113 (Ka = 0.0049, Ks = 0.0301)

PGBD2 ENSBTAG00000019814 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026396, Cow)

Protein Percentage 94.43%
cDNA percentage 93.07%
Ka/Ks Ratio 0.12464 (Ka = 0.0282, Ks = 0.2261)

PGBD2  (Minke Whale)

Gene Details

piggyBac transposable element derived 2

External Links

Gene match (Identifier: BACU002944, Minke Whale)

Protein Percentage 98.65%
cDNA percentage 98.99%
Ka/Ks Ratio 0.31356 (Ka = 0.0062, Ks = 0.0198)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1779 bp    Location:26368..22288   Strand:-
>bmy_22446
ATGGCTTCATCATCAAGCAGCCTCACTACCGGGAGAAGAACCGGTTCACAACTGAAGTCCATGAAGTTGCTTGAGGTTCTGAATGCTCTGGAGGAGGAGGAATCTGGCCAGAGTAGGGAGGAGATCTTCATTGCACCGCCCAACAATGCTTCAGGGGACTTCACTGATGAGGACTCGGGTGATGAAGATGGCCGGCGAGGAACCCACCTGCCCGGCAATGTGCTGCATGCCTTTGTTGTGCCTGAGGACTCTGGCACCGGGGAGGATGATGATGACCTGCAGCTGCAGCCAGCCATGAAGAAGCAAAAGGCAGTAGTGGAACCTCAACATGTTTGGACCAAAAGAGATATCCGCCCGGACTTCACCAGTTGGACAGCATCAGATCCTCATATGGAGGATCTCAAAAGCCAGGAACTGAGTCCTGTAGGCCTCTTTGAATTGTTTTTTGATGAAGGAACAATTAATTTTATTGTTAATGAAACCAATCGTTATGCTTGGCAGAAGAATGTCAACCTGGGTCTCACAGCCCAGGAATTGAAGTGTGTTTTGGGCATTTTGATTTTAAGTGGGTATATCTCCTATCCAAGGAGAAGGATGTTTTGGGAAACATCCCCTGATTCACATCATCATCTTGTGGCTGATGCAATTAGAAGGGACAGATTTGAACTGATCTTCTCATACCTGCATTTTGCAGATAACAATGAGCTTGATGAAAGTGATAGGTTTGCCAAGGTGAGGCCTCTCATTGTCCGCATGAACTACAATTTCCAGAAGCATGCACCCTTGGAAGAGTTCTACAGCTTTGGCGAGTCTATGTGTGAGTACTTTGGACACCGGGGGTCCAAGCATCTGCCTGCGGGGAAACCTGTGCGGCTGGGCTACAAGATCTGGTGTGGGACGACCAGCAGGGGCTATTTGGTGTGGTTCGAGCCCTCACAGGGCACACTGTTCACTAAGCCAGACAGGGGCCTGGACCTAGGAGGCAGTATGGTGGTGAAATTTGTGGATGCACTTCAGACACGTGGGTGTCTGCCATACCACATATTTTTTGACAAGGTTTTTACAAGTGTCAAATTGATGTCCATTTTAAGGAAGAAAGGAGTGAAGGCCACAGGAACTGTTCGTGAGTACAGAACTGAACGATGTCCCCTTAAAGATCCCAAAGAACTGAAGAGAATGAAGAGGGGTTCKTTTGATTACAAAGTTGATGAGAGTGAGGAGATCATCGTGTGCCGCTGGCATGATAGCAGTGTGGTCAACATCTGCTCCAACGCTGTGGGCATAGAGCCAGCAGGGCTGACCAACCATCACTCGGGAGCAGCCAAGACACAGGCCCAGGTTCATCAGCCATCACTGCTGAGGCTGTACCAGGAGAAGGTCGGGGGTGTCGGCCGCATGGACCAGAACATCGCCAAGTACAAGGTGAAGATCCGGGGTATGAAGTGGTACTCGAGTTTCATTGGCTATGTTATTGACGCTGCTCTTAACAATGCATGGCAGCTGCACAGGATATGCTGCCATGATGCCCAGGTGGACCTTCTGGCCTTCCGGAGATATGTGGCCTGCGTGTACCTAGAGAGCAATGCGGATACGTCATCCCAAGGGAGGCGAAGCAGGCGGCTGGAAACCGAGAGCCGCTTTGACATGATTGGGCACTGGATCATCCACCAGGACAAGAGGACCCGGTGTGCCCTGTGCCACTCACAGACCAACACCCGCTGCGAGAAGTGCCAGAAGGGCGTCCATGCCAAGTGCTTCAGGGCGTACCACATCCGGTAA

Related Sequences

bmy_22446T0 Protein

Length: 593 aa      View alignments
>bmy_22446T0
MASSSSSLTTGRRTGSQLKSMKLLEVLNALEEEESGQSREEIFIAPPNNASGDFTDEDSGDEDGRRGTHLPGNVLHAFVVPEDSGTGEDDDDLQLQPAMKKQKAVVEPQHVWTKRDIRPDFTSWTASDPHMEDLKSQELSPVGLFELFFDEGTINFIVNETNRYAWQKNVNLGLTAQELKCVLGILILSGYISYPRRRMFWETSPDSHHHLVADAIRRDRFELIFSYLHFADNNELDESDRFAKVRPLIVRMNYNFQKHAPLEEFYSFGESMCEYFGHRGSKHLPAGKPVRLGYKIWCGTTSRGYLVWFEPSQGTLFTKPDRGLDLGGSMVVKFVDALQTRGCLPYHIFFDKVFTSVKLMSILRKKGVKATGTVREYRTERCPLKDPKELKRMKRGSFDYKVDESEEIIVCRWHDSSVVNICSNAVGIEPAGLTNHHSGAAKTQAQVHQPSLLRLYQEKVGGVGRMDQNIAKYKVKIRGMKWYSSFIGYVIDAALNNAWQLHRICCHDAQVDLLAFRRYVACVYLESNADTSSQGRRSRRLETESRFDMIGHWIIHQDKRTRCALCHSQTNTRCEKCQKGVHAKCFRAYHIR*