Part of scaffold_4197 (Scaffold)

For more information consult the page for scaffold_4197 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCPEP1 ENSTTRG00000011827 (Bottlenosed dolphin)

Gene Details

serine carboxypeptidase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011214, Bottlenosed dolphin)

Protein Percentage 83.11%
cDNA percentage 87.41%
Ka/Ks Ratio 0.59528 (Ka = 0.1208, Ks = 0.2029)

SCPEP1 ENSBTAG00000007893 (Cow)

Gene Details

retinoid-inducible serine carboxypeptidase precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010381, Cow)

Protein Percentage 73.78%
cDNA percentage 80.3%
Ka/Ks Ratio 0.52459 (Ka = 0.1966, Ks = 0.3748)

SCPEP1  (Minke Whale)

Gene Details

serine carboxypeptidase 1

External Links

Gene match (Identifier: BACU006274, Minke Whale)

Protein Percentage 86.88%
cDNA percentage 90.5%
Ka/Ks Ratio 0.59215 (Ka = 0.0888, Ks = 0.1499)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 690 bp    Location:56868..32695   Strand:-
>bmy_22469
GCCATTCAGCAAGGGACCATCCAGTGCAACTTTGCCGGGGTTGCTTTGGGTGACTCCTGGATCTCTCCCATCGGTCTGGCAGAGGTGTCTCGGGTTGCAGAGCAAGTCCTGGATGCCATAAATAAGAGACTCTACAAAGAGGCCACCGAGCTGTGGGGGAAAGCAGAAATGGTCATCGAACAGAACACAGATGGGGTGAACTTCTATAACATCTTAACTAAGACGTCTCCCAYGTCTACCGTGAAATCGAGTCTAGAATTCACCCAGAGCCACCTAGGTTCCAAGCTGCTACCTCTTTCTGCTTCCCCTTGTACAGGCCAGGCTTCCAGTGTCTTCCTGAACATGGAGGGGGACTTCATGAAGCCAGTCATCAGCATTGTGGACGAGCTGCTGGAAGCCGGGGTCAACGTGACTGTGTATAATGGACAGCTTGACCTCATCGTGGACACCATGGGTCAGGAGGCCTGGGTGCGAAAACTGAAGTGGGCAGAACTGCCCAAATTCAGTCAGCTGAAGTGGAAGCCCCTGCACAGGGAYCCTAAGACTTCAGAAACGTCTGCCTTTGTCAAGACCCACAAGAACCTGGCTTTCTACTGGATTCTCAGAGCTGGACACATGGGCACCTGCCGGCTGCTGGTGGGGGACTCTGATACCCCAGGAGACGGGAGGAATGCCAAAGTGAACCGGTAG

Related Sequences

bmy_22469T0 Protein

Length: 230 aa      View alignments
>bmy_22469T0
AIQQGTIQCNFAGVALGDSWISPIGLAEVSRVAEQVLDAINKRLYKEATELWGKAEMVIEQNTDGVNFYNILTKTSPXSTVKSSLEFTQSHLGSKLLPLSASPCTGQASSVFLNMEGDFMKPVISIVDELLEAGVNVTVYNGQLDLIVDTMGQEAWVRKLKWAELPKFSQLKWKPLHRDPKTSETSAFVKTHKNLAFYWILRAGHMGTCRLLVGDSDTPGDGRNAKVNR*