Part of scaffold_4241 (Scaffold)

For more information consult the page for scaffold_4241 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GABRQ ENSTTRG00000005997 (Bottlenosed dolphin)

Gene Details

gamma-aminobutyric acid (GABA) A receptor, theta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005676, Bottlenosed dolphin)

Protein Percentage 93.05%
cDNA percentage 95.71%
Ka/Ks Ratio 0.64937 (Ka = 0.0303, Ks = 0.0467)

GABRQ ENSBTAG00000013002 (Cow)

Gene Details

gamma-aminobutyric acid receptor subunit theta precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053864, Cow)

Protein Percentage 81.53%
cDNA percentage 88.13%
Ka/Ks Ratio 0.4887 (Ka = 0.1051, Ks = 0.2151)

GABRQ  (Minke Whale)

Gene Details

gamma-aminobutyric acid (GABA) A receptor, theta

External Links

Gene match (Identifier: BACU010306, Minke Whale)

Protein Percentage 97.88%
cDNA percentage 98.86%
Ka/Ks Ratio 0.56903 (Ka = 0.0089, Ks = 0.0157)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1842 bp    Location:29539..45166   Strand:+
>bmy_22492
ATGGGCATCCGTGGGACGCTGCGAGCCGCCGTGCTCCTGCTGCTCATCGGAGCCTGGCTCGCGGAGGGCAGCGACCTCAAGCCCGCCCCGAAATTCCACTTCGAGCTCTCCTCCGCCGTGCCCGATGTCGTCCTGGACCTCTTCAAGTGCAAAAATTGTGCAAATGAAGCTATGGTTCACAAGATTTTGGACAGGGTGCTGTCGAAATATGATGTCCGTCTGAGGCCCAATTTTGGAGATCCACGTTTAGCATACTATGAGACCAATCTGAACCTGACCCTGGACTATCAGTTGCTTGAGAAGTTGTGGGTCCCTGACTGCTACTTTCTAAATAGCAAGGATGCTTTTGTGCATGATGTGACTGTGGAAAATCGCGTGTTTCAGCTTCAGCCAGATGGAACGGTGCGGTATGGCATCCGACTCACCACCACAGCAGCTTGTTCCATGAATCTGCAAAAATTCCCTCTGGACAAGCAGACCTGCAAGCTGGAGGTGGAAAGCTATGGCTACACAGTTGAAGACATCCTATTRTACTGGGAAGGCAATGGGAATGCCATCCAGGGTACTGAGAAGCTGCACATCCCTCAGTTCAGCTTCCTGGGAAAGACGATGACTAGCAAAGAGGTGTTTTTCTACACAGGTTCCTATGTGCGCCTGATAGTGAGGTTCCTGGTCAAGAGGGAAGTCATCAGCTACCTTGTGCAGATCTATTGGCCTACTGTCCTCACCACTGTTGTTTCCTGGATATCATTTTGGATGAACTATGAATCCTCTGCAGCCAGGGTGTCAGTAGGTTTGACTTCAATGCTCATCCTGAACGCCATCAACTCACATCTGCGCAATAAACTCCCCCAATTTTCCTGTATCAAGGCCATTGACATCTATATGGTCGTATGCTTCTTCTTCGTGTTCCTGTCCTTGCTAGAATACGTCTACATCAACTATCTTTTCTACAGCCGAAGAGGACCTCAGCGCTCTCAGAGGCAACTCAGAAGAGCCCAAAGAGTCATGGCCAGCTACCGCTACCAAGAGGCGATGCAGGATGACCAGTTTCACATAGAAGATGAAAATGGCTCTCCTCCCTCCAGACGGGTGTGGGCTGGCCTAGCAAGCCCAGAAAGCCTCGGCTCTTTAGCCTCCATCTCAGAACAGGCACCTCTGGCCTCCTCAGAAAGCCTCAGCTCACTGTCTTCTCTCTCGGACCAGTCCTGGCTGGCCACTGCAGAAAGCCTGAGTGACCTCCCGTCCACCTCAGAGCAGGCCGTGCCCAGCTATGGCATTCACGTTAATGGTATTGATACTGATGACAGTGTTATTCCTACTGAAATCCGCAACCGTGCCGAGGCCCATGGCCGTGCTGAGACCYGTGACCCAGAAGACCCTGAAGAGAGCTCCAACTCCAATGAGAGCCAAGACCATGGCCCCAGTAGGAAGCATCTGCTTGTCCACGGCCGGAGGTGTGTGCAAGAAGCAAACTACGACCTTGAGGAGATCCGTAACACCCTTGATGAGATCCATAGCACCCTTCATGACATTCGTAGCTTGCCTGATGACGTCAGAGTTGAGAGTGGCTACCTTGACCTTGAGAAGCAACTCAAGTGTAATGTTGACAGTACCTGGAGCCTTTATGGTAATGTTATGGGCTTTGATCCAGACAAGAACAGTAACTCGGAGTCTGATGACGGTTCCCCCCCAAGCCCTGGGTGCTCCTTCAGTAAAGGGTTCTCTTCCAAGCTCTTTCACCCTGACTACATCCCTAAGGTTGACCGGTGCTCCCGGCTCCTCTTCCCTCTTGCCTTTGTGGTGTTCAACATTGTTTACTGGGTGTACCATATCTATTAG

Related Sequences

bmy_22492T0 Protein

Length: 614 aa      View alignments
>bmy_22492T0
MGIRGTLRAAVLLLLIGAWLAEGSDLKPAPKFHFELSSAVPDVVLDLFKCKNCANEAMVHKILDRVLSKYDVRLRPNFGDPRLAYYETNLNLTLDYQLLEKLWVPDCYFLNSKDAFVHDVTVENRVFQLQPDGTVRYGIRLTTTAACSMNLQKFPLDKQTCKLEVESYGYTVEDILLYWEGNGNAIQGTEKLHIPQFSFLGKTMTSKEVFFYTGSYVRLIVRFLVKREVISYLVQIYWPTVLTTVVSWISFWMNYESSAARVSVGLTSMLILNAINSHLRNKLPQFSCIKAIDIYMVVCFFFVFLSLLEYVYINYLFYSRRGPQRSQRQLRRAQRVMASYRYQEAMQDDQFHIEDENGSPPSRRVWAGLASPESLGSLASISEQAPLASSESLSSLSSLSDQSWLATAESLSDLPSTSEQAVPSYGIHVNGIDTDDSVIPTEIRNRAEAHGRAETXDPEDPEESSNSNESQDHGPSRKHLLVHGRRCVQEANYDLEEIRNTLDEIHSTLHDIRSLPDDVRVESGYLDLEKQLKCNVDSTWSLYGNVMGFDPDKNSNSESDDGSPPSPGCSFSKGFSSKLFHPDYIPKVDRCSRLLFPLAFVVFNIVYWVYHIY*