Part of scaffold_4383 (Scaffold)

For more information consult the page for scaffold_4383 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYNDIG1 ENSTTRG00000002192 (Bottlenosed dolphin)

Gene Details

synapse differentiation inducing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002055, Bottlenosed dolphin)

Protein Percentage 83.07%
cDNA percentage 86.24%
Ka/Ks Ratio 0.19905 (Ka = 0.1118, Ks = 0.5617)

SYNDIG1 ENSBTAG00000040147 (Cow)

Gene Details

Synapse differentiation-inducing gene protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051406, Cow)

Protein Percentage 80.32%
cDNA percentage 81.21%
Ka/Ks Ratio 0.11891 (Ka = 0.1339, Ks = 1.1258)

SYNDIG1  (Minke Whale)

Gene Details

synapse differentiation inducing 1

External Links

Gene match (Identifier: BACU014826, Minke Whale)

Protein Percentage 88.36%
cDNA percentage 89.42%
Ka/Ks Ratio 0.16587 (Ka = 0.0774, Ks = 0.4668)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 570 bp    Location:18317..18886   Strand:+
>bmy_22536
ATGGCTGGAGTCGTGGAGCAGAAGAGCGGGCTGGTGCGCAGCAAGCTCGGCGAGGCCGGCAAGAGGAATGGCCTGATCAACACCCGAAGCCTCGTGGCTGAGAGCAGGGATGGCCTGGTGTCCGTGTACCCGGCGCCCCAGTACCAGAGCTGCCGGGTGGTGGGCAACGTGGCACCGGCCGCCCCGGATGGCAGCAGGAACAAGCCAGTCCAGCAGCTGCTGGACCCCAACACCCTCCAGCAGTCGGTGGAGTCCCTCTACCGGCCCAACATCATCCTCTACTCGGAGGGCGTGCTGCACCCCTGGGGGGACAGCGTGGCGGCCGACTGCTGTGAGACCACCTTCATCGAGGACCGGTCGCCCTCCAAGGAGAGCCTGGAGTACCCCGACGGCAAGTTCCTCGACCTCTCGCCTGAAGACATCAAGATCCACACGCTCTCCTACGACGTGGAGGAGGAGGAGGAGGAGTTCCAGGAGCTGGAGGTCAGAGCGTGTGTTTGTCATGGGCCTTCGGGAGCAGGGTGTGGGGCTCTGGGGGGGTACGAGTGCCAGGCAGAAGTCGGGGCGTGA

Related Sequences

bmy_22536T0 Protein

Length: 190 aa      View alignments
>bmy_22536T0
MAGVVEQKSGLVRSKLGEAGKRNGLINTRSLVAESRDGLVSVYPAPQYQSCRVVGNVAPAAPDGSRNKPVQQLLDPNTLQQSVESLYRPNIILYSEGVLHPWGDSVAADCCETTFIEDRSPSKESLEYPDGKFLDLSPEDIKIHTLSYDVEEEEEEFQELEVRACVCHGPSGAGCGALGGYECQAEVGA*