Sequence details bmy_22581 (Coding sequence)

Part of scaffold_4563 (Scaffold)

For more information consult the page for scaffold_4563 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TKTL1 ENSTTRG00000013914 (Bottlenosed dolphin)

Gene Details

transketolase-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013194, Bottlenosed dolphin)

Protein Percentage 79.84%
cDNA percentage 87.0%
Ka/Ks Ratio 0.68439 (Ka = 0.113, Ks = 0.1651)

TKTL1 ENSBTAG00000020127 (Cow)

Gene Details

Transketolase-like protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000036249, Cow)

Protein Percentage 74.54%
cDNA percentage 81.79%
Ka/Ks Ratio 0.50095 (Ka = 0.177, Ks = 0.3534)

TKTL1  (Minke Whale)

Gene Details

transketolase-like 1

External Links

Gene match (Identifier: BACU011433, Minke Whale)

Protein Percentage 88.99%
cDNA percentage 92.46%
Ka/Ks Ratio 0.5181 (Ka = 0.0669, Ks = 0.1292)

Additional orthologs identified in other species via the OPTIC pipeline.

TKTL1 (Human)  

Genome Location

Sequence Coding sequence

Length: 1134 bp    Location:11841..28385   Strand:+
Raw sequence 
>bmy_22581
ATGGCTGACAAGGAGGCGAACGGAGCGATGGCGGAAGAAGCCAAGCTTGACGAGAACATCTTGCAGGTGCTGCAAGACATGGCCAATCGCCTGCGCCTCCACGTCATCAGGTCCCTCTGTGCCTCAAGCTCTCGCCACCCCACATTGTGCAGCAGTGCTGCTGAGATCATGTCTGTGCTGTTTTTCTACATCATGAGGTATAAACAGATGGACCCGGAGAACCCGAACAATGACAGATTCGTCCTCTCCAAGAGTCTGTCGTTTGTTAATGTGGCAACTGGATGGCTGGGGCAAGGACTGGGGGTCGCGTGTGGGATGGCATATACTGGCAAGTACTTTGACAAGGCCAGCTACCGGGTGTTCTGCCTCATTGGAGGTGGCGAGTCCTCGGAAGGCTCCGTCTGGGAGGCCATGGCCTTTGCTTCCCACCACAGTCTGGACAACCTCGTGGCCATCTTTGACGTGAATCGCCTGTGCCACAGCGGTACCCTGCCCCTCAAGCACTGCACAGACGTCTTTCAGAAGCGCTGTGAAGCCTTTGGGTGGAATACTTTCGTGGTGGATGGCCGCGATGTGGAGGCACTGTGCCAGGTGTTCCAGCAGGCGGCTCAAGTGAAGAGCAAGCCCACTGCTATAGTTGCCAAGACCTTCAGGGGCCACGGCATGCCGCATGTTGAGGATTCAGAAAATTGGCATGAAAGGCCAATGCCAAAAGAAAGAGTGGATACAATTATCAAACTAATTGAGAGCCAGATACAGACCAAGAAGAAGCTTGACCCAAAACCCCCTGTTGAAGACTCGCCTCAAATCAACATCACAGATATAGAAATGATCTCTCCACCTGCTTACAATGTTGGTGACACGATAGCTACTCGGAAAGCATGTGGTTTGGCTCTGGCTAAGCTGGGCCATGCAAATGACAGAGTCGTTGTGCTGGACGGTGACAGCAAGAACTCCACCTTCTCTGAGATATTCAAGAAGGAACACCCTGAGCGCTTCGTTGAGTGTTTTATTGCTGAGCAAAACATGGTATGTATGCTGGGGACATCCATCTTGAGTCTTCTCATTGACAAACAGTGGCCCACCAGACATAGGAGGCCTGCGCTGTGTTACAGTTTTTCTTTCCACTTATAA

Related Sequences

bmy_22581T0 Protein

Length: 378 aa      View alignments
>bmy_22581T0
MADKEANGAMAEEAKLDENILQVLQDMANRLRLHVIRSLCASSSRHPTLCSSAAEIMSVLFFYIMRYKQMDPENPNNDRFVLSKSLSFVNVATGWLGQGLGVACGMAYTGKYFDKASYRVFCLIGGGESSEGSVWEAMAFASHHSLDNLVAIFDVNRLCHSGTLPLKHCTDVFQKRCEAFGWNTFVVDGRDVEALCQVFQQAAQVKSKPTAIVAKTFRGHGMPHVEDSENWHERPMPKERVDTIIKLIESQIQTKKKLDPKPPVEDSPQINITDIEMISPPAYNVGDTIATRKACGLALAKLGHANDRVVVLDGDSKNSTFSEIFKKEHPERFVECFIAEQNMVCMLGTSILSLLIDKQWPTRHRRPALCYSFSFHL*