Part of scaffold_4632 (Scaffold)

For more information consult the page for scaffold_4632 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AP3D1 ENSTTRG00000011541 (Bottlenosed dolphin)

Gene Details

adaptor-related protein complex 3, delta 1 subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010946, Bottlenosed dolphin)

Protein Percentage 92.73%
cDNA percentage 92.62%
Ka/Ks Ratio 0.17405 (Ka = 0.0468, Ks = 0.269)

AP3D1 ENSBTAG00000009034 (Cow)

Gene Details

AP-3 complex subunit delta-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011906, Cow)

Protein Percentage 93.03%
cDNA percentage 89.9%
Ka/Ks Ratio 0.07145 (Ka = 0.0408, Ks = 0.5713)

AP3D1  (Minke Whale)

Gene Details

adaptor-related protein complex 3, delta 1 subunit

External Links

Gene match (Identifier: BACU006492, Minke Whale)

Protein Percentage 94.98%
cDNA percentage 95.84%
Ka/Ks Ratio 0.23053 (Ka = 0.0292, Ks = 0.1268)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1854 bp    Location:27091..2840   Strand:-
>bmy_22602
ATGCTCGGATATGACATCAGCTGGGCCGCCTTCAACATCATAGAAGTGATGAGCGCCTCCAAGTTCACATTCAAGCGAATCGGCTACCTCGCTGCTTCCCAGTGCTTTCACGAAGGGACCGACGTCATCATGCTGACCACCAACCAGATCCGCAAGGACCTGAGCAGCCCCAGCCAGTATGACACTGGCGTTGCGCTGACTGGCCTGTCCTGTTTTGTTACCCCAGATCTTGCCAGAGACTTGGCCAACGACATCATGACACTGATGTCGCACACCAAGCCGTACATCCGGAAGAAGGCTGTGCTGATCATGTACAAGGTGTTCCTGAAGTACCCTGAGTCTCTGCGCCCCGCCTTTCCCCGCCTGAAGGAGAAGCTGGAGGACCCCGATCCCGGGGTCCAGTCAGCGGCAGTCAACGTCATCTGTGAGCTGGCCAGACGTAACCCCAAGAACTACCTTTCCCTCGCCCCGCTCTTCTTCAAGCTCATGACCTCCTCCACCAACAACTGGTTTGGTGCTCTGACCCCCTTGGAGCCAAGGTTGGGTAAGAAGCTGATTGAGCCTCTCACCAACCTGATCCACAGCACGTCTGCCATGTCCCTTCTCTACGAGTGTGTCAACACCGTCATCGCAGTGAAGTACCTGGGGCTCCTGGCCATGTCCAAGATCCTGAGGACGCACCCCAAGTCCGTGCAGGCGCACAAGGATCTTGTCCTGCAGTGCCTGGATGACAAGGACGAGTCCATCCGGCTGCGGGCCCTCGACCTCCTGTACGGCATGGTGTCCAAGAAGAACCTGATGGAGATCGTCAAGAAGCTGATGACCCACGTGGACAAGGCCGAGGGCACGACCTACCGCGACGAGCTGCTCACCAAGATCATCGACATCTGCAGCCAGTCCAACTACCAGCACATCACCAACTTCGAGTACATCAGCATCCTGGTGGAGTTGACCCGGCTGGAGGGCACCCGCCACGGCCACCTCATCGCCGCCCAGATGCTGGATGTGGCCATCCGCGTGAAGGCCATCCGCCGGTTTGCCGTGTCGCAGATGTCCGCGCTGCTCGACAGCGCCCATCTGGTGGCCAGCAGCACCCAGCGCAGTGGCATCTGCGAGGTGCTCTACGCGGCTGCCTGGATCTGCGGGGAGTTCTCCGAGCACCTACAGGAGCCCCAGCAGACCCTCGAGGCCATGCTGCGGCCCAAAGTCACCACCCTGCCGGGCCACATCCAGGCCGTGTACGTGCAGAACGTGGTCAAACTGTACGCAGCCATCCTGCAGCAGCAGGAGCGGGCCGCGGACACGCAGGCGGCCCAGGAGGTCACGCAGCTCCTGGTGGAGCGGCTGCCCCAGTTTGTGCAGAGCGCGGACCTGGAAGCCCAGGAGCGGGCGTCCTGCATCTTGCAGCTGGTCAAGCACGTCCAGAAGCTTCAGGCCAGAGATGTGCCAGTGGCAGAAGAAGTGAGCGCCCTCTTTGCTGGGGAGCTGAACCCGGTGGCTCCCAAGGCACAGAAGAAGGTTCCAGTCCCCGAAGGCCTGGACCTGGACGCCTGGATCAATGAGCCGCTCTCGGACAGTGAGTCTGAGGATGAGAAGCCCAAGGCCATCTTCCACGACGAGGAGCCACGGCACGCCAAGCAGCGGCCGCCCGAGGCAGACGAGCAGGAACTGGCCCGGCGCCGCGAGGCCCGGAAGCAGGAGCAGGCCAACAACCCATTCTACATCAAGAGTTCCCCGTCCCCCCAAAAGGTGAGGCCGGCCTGCTCGTCCTTGAGACACGCTCCCACGGGGCCCGTCCGCTCTCTGTCCACAGCCCATGCGGGGCTGTCAGCAGGTCCACAGGCAGGACCGTGA

Related Sequences

bmy_22602T0 Protein

Length: 618 aa      View alignments
>bmy_22602T0
MLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNFEYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRRFAVSQMSALLDSAHLVASSTQRSGICEVLYAAAWICGEFSEHLQEPQQTLEAMLRPKVTTLPGHIQAVYVQNVVKLYAAILQQQERAADTQAAQEVTQLLVERLPQFVQSADLEAQERASCILQLVKHVQKLQARDVPVAEEVSALFAGELNPVAPKAQKKVPVPEGLDLDAWINEPLSDSESEDEKPKAIFHDEEPRHAKQRPPEADEQELARRREARKQEQANNPFYIKSSPSPQKVRPACSSLRHAPTGPVRSLSTAHAGLSAGPQAGP*