Part of scaffold_4721 (Scaffold)

For more information consult the page for scaffold_4721 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TACR1 ENSTTRG00000003037 (Bottlenosed dolphin)

Gene Details

tachykinin receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002852, Bottlenosed dolphin)

Protein Percentage 95.28%
cDNA percentage 97.48%
Ka/Ks Ratio 0.45939 (Ka = 0.0195, Ks = 0.0426)

BT.27987 ENSBTAG00000015575 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020684, Cow)

Protein Percentage 92.92%
cDNA percentage 93.87%
Ka/Ks Ratio 0.14103 (Ka = 0.0299, Ks = 0.212)

TACR1  (Minke Whale)

Gene Details

tachykinin receptor 1

External Links

Gene match (Identifier: BACU011844, Minke Whale)

Protein Percentage 9.23%
cDNA percentage 38.97%
Ka/Ks Ratio 0.12028 (Ka = 1.3006, Ks = 10.8132)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 636 bp    Location:6940..16715   Strand:+
>bmy_22624
TACCACATCTGTGTGACTGTGTTGATCTACTTCCTCCCCCTGCTGGTGATAGGTTATGCGTACACTGCAGTGGGCATCACACTGTGGGCCAGCGAGATCCCTGGGGACTCCTCTGACCGTTACCACGAGCAAGTCTCTGCCAAGCGCAAGGTGGTAAAGATGATGATTGTTGTTGTATGCACCTTTGCCATCTGCTGGCTGCCCTTCCACATCTTCTTCCTCCTGCCTTACATCAACCCTGATCTCTACCTGGAGAAGTTTATTCAGCAGGTTTACCTGGCCATCATGTGGCTGGCCATGAGCTCTACAATGTACAACCCCATCATCTACTGCTGCCTCAATGACAGGTTTCGTCTGGGCTTCAAGCATGCCTTTCGGTGCTGCCCTTTCATCAGTGCTGGTGACTATGAGGGGCTCGAAATGAAATCCACTAGGTACCTCCAGACGCAGGGCAGTGTGTATAAAGTCAGCCGCCTGGAGACCACTGTCTCCACAGTGGTGGGGACCCATGAGGAAGACSTGGAGGAAGGTCCTAAGGCCATGCCCTCATCCCTGGACAAGACCTCCAATGACTCCTCTCGCAGCGACTCTAAGACCATGATGGAGAACTTCAGCTTCTACTCCAACATGCTCTCC

Related Sequences

bmy_22624T0 Protein

Length: 212 aa      View alignments
>bmy_22624T0
YHICVTVLIYFLPLLVIGYAYTAVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLEKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTVSTVVGTHEEDXEEGPKAMPSSLDKTSNDSSRSDSKTMMENFSFYSNMLS