Part of scaffold_5122 (Scaffold)

For more information consult the page for scaffold_5122 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FARSB ENSTTRG00000009082 (Bottlenosed dolphin)

Gene Details

phenylalanyl-tRNA synthetase, beta subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008622, Bottlenosed dolphin)

Protein Percentage 74.73%
cDNA percentage 77.59%
Ka/Ks Ratio 0.69794 (Ka = 0.0356, Ks = 0.051)

FARSB ENSBTAG00000011649 (Cow)

Gene Details

phenylalanyl-tRNA synthetase beta chain

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015473, Cow)

Protein Percentage 91.03%
cDNA percentage 92.67%
Ka/Ks Ratio 0.2596 (Ka = 0.0464, Ks = 0.1788)

FARSB  (Minke Whale)

Gene Details

phenylalanyl-tRNA synthetase, beta subunit

External Links

Gene match (Identifier: BACU008711, Minke Whale)

Protein Percentage 95.55%
cDNA percentage 97.68%
Ka/Ks Ratio 0.57783 (Ka = 0.0203, Ks = 0.0351)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location:422..2062   Strand:+
>bmy_22678
ATGCCTACTGTCAGCCTAAAGCGCGATCTGCTCTTCCGAGCTCTGGGCCGGACCTACATGGACGGAGAATTTGATGAACTATGTTTTGAATTTGGTCTGGAACTTGATGAAATTACATCTGAGAAAGAAATTTTAAGTAAGGAACAAGGTAATGAAAAGGCACAGGGGGCCTCTAATGTTGTTCTCTACAAAACTGATGTCCTTGCCAATAGATATGATCTCCTGTGTCTGGAAGGATTGGTTCGAGCACTTCAGGTCTTCAAAGAAAGGATAAAGGCTCCAATGTATAAACGGGTAATGCCTAATGGAGAAAGCCAGAAATTGATCATCACAGAAGAGACAGCTAAAATACGCCCGTCCGCTGTTGCAGCGGTTCTCCGAAACATAAAGTTTACTAAAGATCGATATGACAGCTTCGTTGAACTTCAGGAGAAGTTACATCAGAACATTTGCAGGAAAAGAGCCTTGGTTGCTATTGGTACCCGGGACTTGGACACTTTGTCAGGCCCATTTACTTATACTGCGAAGAAACCTTCCGATATCAAATTCAAGCCTCTAAATAAGACCAAGGAGTATACAGCCTGTGAACTGATGAACGTATACAAGACTGACAACCACCTTAAACATTATTCACATATAATTGAAAATAAACTTCTGTATCCGGTTATCTATGATAGCAATGGTGTCGTCCTTTCAATGCCTCTAGCCATCAATGGAAAGCATTCCAAAATAACAGTAAATACTAGAAATGTATTTATTGAATGCACAGGGACTGACTTTACTAAGGCAAAAATAGTTCTTGATATCATTGTTACCACGTTCAGTGAATATTGTGAGAATCAATTTACAGTTGAAGCAGCTGAAGTAGTTTTTCCTAATGAAAAATTACATACCTTTCCAGAACTGGCTTATCGAAAGGAGATGGTGAGAGCTGATCTAATTAACAAAAAAGTTGGGGTCAGAGAAACTCCAGAAAATCTTGCCAAGCTTCTGACCAGGATGTGTTTAAAGTCAGAAGTCATAGGCGATGGGGATCAGATTGAGATCGAAATCCCTCCGACCAGAAATGACATTATCCACGCTTGTGATATCATAGAAGATGCAGCTATTGCTTATGGATATAACAACATTCAGATGACTCTCCCGAAAACATACACCATAGATAATGAATTTCCCCTAAATAAACTCACAGAACTCCTGAGACACGACATGGCAGCTGCTGGATTCACTGAGGCACTTACCTTTGCTCTGTGCTCCCAAGAAGATATTGCTGATAAACCGGGTTTGGATATCTCTGCAAAAAAGGCAGTCCACATAAGTAATCCTATAACAGCTGAATTTCAGGTGGCACACACTACCCTTCTTCCTGGCCTCCTAAAGACCATAGCTGTGAATCGGAAGATGCCCTTTCCTCTGAAACTGTTTGAAATCTCTGACATTGTAAGAAAAGATTCTAGCAGAGATGTAGGTGCAAGAAACTACAGGCATCTATGTGCTGTTTATTACAACAAGAATTCTGGGTTTGAGATAATCCATGGGCTTCTGGACAGAATCACGCAGCTACTTGATGTGCCTCCTGGTAAAAAGAAGGGAGGATACCTGATCAAAGCATCAGAAAGCCCTGCATTCTTCCCCGGGTGA

Related Sequences

bmy_22678T0 Protein

Length: 547 aa      View alignments
>bmy_22678T0
MPTVSLKRDLLFRALGRTYMDGEFDELCFEFGLELDEITSEKEILSKEQGNEKAQGASNVVLYKTDVLANRYDLLCLEGLVRALQVFKERIKAPMYKRVMPNGESQKLIITEETAKIRPSAVAAVLRNIKFTKDRYDSFVELQEKLHQNICRKRALVAIGTRDLDTLSGPFTYTAKKPSDIKFKPLNKTKEYTACELMNVYKTDNHLKHYSHIIENKLLYPVIYDSNGVVLSMPLAINGKHSKITVNTRNVFIECTGTDFTKAKIVLDIIVTTFSEYCENQFTVEAAEVVFPNEKLHTFPELAYRKEMVRADLINKKVGVRETPENLAKLLTRMCLKSEVIGDGDQIEIEIPPTRNDIIHACDIIEDAAIAYGYNNIQMTLPKTYTIDNEFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKPGLDISAKKAVHISNPITAEFQVAHTTLLPGLLKTIAVNRKMPFPLKLFEISDIVRKDSSRDVGARNYRHLCAVYYNKNSGFEIIHGLLDRITQLLDVPPGKKKGGYLIKASESPAFFPG*