Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TAF8 ENSTTRG00000009441 (Bottlenosed dolphin)

Gene Details

TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008947, Bottlenosed dolphin)

Protein Percentage 88.7%
cDNA percentage 89.92%
Ka/Ks Ratio 0.6053 (Ka = 0.0948, Ks = 0.1567)

TAF8 ENSBTAG00000011339 (Cow)

Gene Details

Transcription initiation factor TFIID subunit 8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035931, Cow)

Protein Percentage 86.23%
cDNA percentage 86.45%
Ka/Ks Ratio 0.38564 (Ka = 0.1126, Ks = 0.2919)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 921 bp    Location:5574879..5556156   Strand:-
>bmy_00086
ATGGCCGACGCGGCGGCCACTGCCGGGGCTGGCAGCTCCGGAACGAGATCAGGAAGTAAACAGTCCACTAACCCTGCTGATAACTACCATCTGGCCCGAAGGCGAACCCTGCAAGTGGTTGTGAGCTCSCTGCTGACAGAGGCAGGGTTTGAGAGCGCTGAGAAAGCATCTGTGGAAACATTGACAGAGATGCTGCAGAGCTACATTTCAGAAATTGGGAGGAGTGCCAAGTCTTACTGTGAGCACACAGCCAGGACGCAGCCCACACTGTCAGATATTGTGGTCACCCTTGTCGAGATGGGTTTCAATGTGGACACTCTCCCTGCTTATGCAAAACGGTCTCAGAGGATGGTCATCACTGCCCCTCCAGTGACCAATCAGCCGGTGACCCCCAAGGCCCTCACTGCAGGACAGAACCGACCCCACCCGCCACACATCCCCAGCCATTTTCCCGAGTTCCCCGACCCCCACACCTACATCAAAACTCCGACGTACCGTGAGCCCGTGTCGGACTATCAGGTCCTGCGGGAGAAGGCCGCATCCCAGAGACGAGACGTGGAGCGGGCACTCACCCGTTTTATGGCCAAGACTGGCGAGACCCAGAGTCTTTTCAAAGATGACGTCAGCACGTTTCCCTTGATTGCTGCCAGGCCTTTCACCATCCCCTACCTGACCGCTCTTCTTCCGTCTGAGCTGGAGATGCAACAAATGGAGGAGACGGATTCCTCGGAGCAGGATGAGCAGACAGACACAGAGAACCTCCCTCTTCACATCAACACGGTGGGTCCTGCCTTCTGCCCGCTTCAGCATGCCCCCCGCAGTAGCCCGTGCTGCTCTCTGCCTATCACCCTGGGGATTGGACAGGACCTACCTCAGGTCTCTGGCCCCATGTTAGGGACTTGCATGATGGGCCCGCGGTGA

Related Sequences

bmy_00086T0 Protein

Length: 307 aa      View alignments
>bmy_00086T0
MADAAATAGAGSSGTRSGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNVDTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPYLTALLPSELEMQQMEETDSSEQDEQTDTENLPLHINTVGPAFCPLQHAPRSSPCCSLPITLGIGQDLPQVSGPMLGTCMMGPR*