Sequence details bmy_00104 (Coding sequence)

Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VTN ENSTTRG00000010166 (Bottlenosed dolphin)

Gene Details

vitronectin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009640, Bottlenosed dolphin)

Protein Percentage 82.27%
cDNA percentage 84.4%
Ka/Ks Ratio 0.36414 (Ka = 0.049, Ks = 0.1346)

VTN ENSBTAG00000016151 (Cow)

Gene Details

vitronectin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021497, Cow)

Protein Percentage 79.18%
cDNA percentage 84.65%
Ka/Ks Ratio 0.31496 (Ka = 0.1246, Ks = 0.3955)

VTN  (Minke Whale)

Gene Details

vitronectin

External Links

Gene match (Identifier: BACU010509, Minke Whale)

Protein Percentage 93.24%
cDNA percentage 95.77%
Ka/Ks Ratio 0.50598 (Ka = 0.037, Ks = 0.0731)

Additional orthologs identified in other species via the OPTIC pipeline.

(Human)   Vtn (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1245 bp    Location:422093..419418   Strand:-
Raw sequence 
>bmy_00104
ATTATAGAACAGAAAAAAATCATCGGAATCTCTGAGGATCACTCCCTCCAGGTGGTGGGAGGACTTCCAGAGGCATCAGAGCAGAGACCGCAGAGAACCTACTTCACCAGGCTCGAGGCTGGAGGCCCTGCCATGGCATCCCCAAGGCCCCTTCTGATGCTGGCCCTGCTGGCGTGGGTTGTTCTGGCTGACCAAGAGTCGTGCAAGGGCCGCTGCACTGAGGGCTTCAACGCCGACAGAAAGTGTCAGTGTGACGAGCTCTGCTCTTACTACCAGAGCTGCTGCTCCGACTACGTGGTCGAGTGCAAGCCCCAAGTGACTCGTGGGGATGTATTCACTCTGCCAGAAGACGAGTACAGCTTCCATGACTACCACGAGGAGACCAGATCCAATACCAGCGTCCAGGCACAGCCAGAGAGCTCCACCCAGACCTTTGTCCAGCAGGCCCAGCCTGAAGAGACTCCTGAGCAGGCACCTGTTCTGAACCCTGAGGAAGAATCCCCAGGACCCGGGCGGGGGAACTCAGAGCCTGAGGTGGGGCCCCTCAGTCCCGAGACTGGTAATCTAGGGATCTCCGAGTCCCCAGCAGAGGAAGAGCAGTGCAGTGGGAAGCCCTTTGATGCCTTCACCGACCTCAAGAATGGTTCCCTCTTTGCCTTCCGAGGGCTCTACTGCTATGAGCTGGATGAAAAGGCAGTGAGGCCTGGGTACCCCAAGCTCATCCGTGATGTCTGGGGCATCGAGGGTCCCATTGATGCTGCCTTCACCCGCATCAACTGTCAGGGGAAGACCTACCTCTTCAAGGGTAGTCAGTACTGGCGCTTTGAAGATGGTGTCCCGGACCCCGATTTCCCCCGCAACATCTCTGAAGGCTTCAAGGGCATTCCGGACAACGTGGACGCAGCCTTGGCCCTCCCCGCTCATAGCTACAGTGGCCGGGAGCGGGTCTACTTCTTCAAGGGTACTCAGGAGGAGCTCCTAACTTCCACAGCCTCTGGGCTTTCCAGTCTTGCTCATGGCCACCCTTCCCCAGGGAAACAGTACTGGGAGTACGAGTTCCAGCAGCAGCCCAGTCAAGAGGAGTGCGAAGGCAGCTCCCAGTCGGCCGTGTTTGAACACTTTGCCCTGATGCAGCGGGACAGCTGGGAGGACATCTTCAGACTTCTCTTCTGGGGCAGTTCCTCTGGTACAGAGGGAGGGCAAGTCTTTCTTCCCCGTCCAGAGGGCTGGGATCCCCCAGGGTAG

Related Sequences

bmy_00104T0 Protein

Length: 415 aa      View alignments
>bmy_00104T0
IIEQKKIIGISEDHSLQVVGGLPEASEQRPQRTYFTRLEAGGPAMASPRPLLMLALLAWVVLADQESCKGRCTEGFNADRKCQCDELCSYYQSCCSDYVVECKPQVTRGDVFTLPEDEYSFHDYHEETRSNTSVQAQPESSTQTFVQQAQPEETPEQAPVLNPEEESPGPGRGNSEPEVGPLSPETGNLGISESPAEEEQCSGKPFDAFTDLKNGSLFAFRGLYCYELDEKAVRPGYPKLIRDVWGIEGPIDAAFTRINCQGKTYLFKGSQYWRFEDGVPDPDFPRNISEGFKGIPDNVDAALALPAHSYSGRERVYFFKGTQEELLTSTASGLSSLAHGHPSPGKQYWEYEFQQQPSQEECEGSSQSAVFEHFALMQRDSWEDIFRLLFWGSSSGTEGGQVFLPRPEGWDPPG*