Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SARM1 ENSTTRG00000010170 (Bottlenosed dolphin)

Gene Details

sterile alpha and TIR motif containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009647, Bottlenosed dolphin)

Protein Percentage 98.31%
cDNA percentage 98.08%
Ka/Ks Ratio 0.08348 (Ka = 0.007, Ks = 0.0835)

SARM1 ENSBTAG00000002816 (Cow)

Gene Details

sterile alpha and TIR motif-containing protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003645, Cow)

Protein Percentage 94.51%
cDNA percentage 92.78%
Ka/Ks Ratio 0.06127 (Ka = 0.0247, Ks = 0.4039)

SARM1  (Minke Whale)

Gene Details

sterile alpha and TIR motif containing 1

External Links

Gene match (Identifier: BACU010508, Minke Whale)

Protein Percentage 99.83%
cDNA percentage 99.45%
Ka/Ks Ratio 0.02263 (Ka = 0.0007, Ks = 0.0299)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2136 bp    Location:422882..439204   Strand:+
>bmy_00105
ATGGTCCTGACGCTGCTCCTCTCCGCCTACAAGCTGTGCCGCTTCTTCGCCATGTCGGGCCCACGGCCGGGCGCCGAGCGGCTAGCGGTGCCGGGGCCGGACGGGAGCGGCTGCGCTGGGCCGTGGTGGGCGGCGGGCGGCCGCGGGCCCCGCGAGGTGTCGCCAGGGGCGAGCACCGAGGTGCAGGGCGCCCTGGAGCGCGCGCTGCCCGAGCTGCAGCAGGCGCTGTCGGCTCTGAAGCAGGCAGGCGGCGTGCGGGCCGTGGGAGCCAGCCTAGCCGAGGTCTTCCAGCTGGTGGAGGAGGCCTGGCTGCTACCGGCCATGGGCCGCGAGGTAGCCCAGGGTCTGTGCGACGCCATCCGCCTGGACGGTGGTTTGGACCTTCTGCTGCGCCTGCTGCAGGCGCCGGAGCTGGAGACGCGCGTGCAGGCTGCCCGCCTGCTGGAGCAGATCCTGGTGGCAGAGAACCGGGACCGAGTGGCGCGCATCGGGCTGGGCGTGATCCTGAACCTGGCAAAGGAGCGGGAGCCGGTGGAGCTGGCGCGGAGCGTGGCCGGCATTTTGGAGCACATGTTCAAGCACTCGGAGGAGACGTGCCAGCGGCTGGTGGCGGCCGGCGGCCTGGACGCGGTGCTGTACTGGTGCCGCCGCACGGACCCGCCGCTGCTCCGCCACTGCGCGCTGGCGCTGGCCAACTGCGCGCTGCACGGGGGCCAGGCGGCGCAGCGGCGCATGGTGGAGAAGCGCGCCGCCGAGTGGCTCTTCCCGCTCGCCTTCTCCGAGGACGAGCTGCTCCGACTGCACGCCTGCCTCGCCGTGGCGGTGCTGGCCACCAACAAGGAGGTGGAGCGCGAGGTGGAGCGCTCGGGCACGCTGGCCCTCGTGGAGCCGCTAGTGGCCTCACTGGACCCCGGCCGCTTCGCCCGCTGCCTGGTGGACGCCAGTGACACCAGCCAGGGCCGCGGGCCTGACGACCTGCAGCGCCTCGTGCCGCTGCTTGACTCGTCGCGCTTGGAGGCGCAGTGCATCGGGGCTTTCTACCTCTGTGCCGAGGCTGCCATCAAGAGTGCCATCCAGAGCCTGAAACGCCTCGTCTCCTACTCCACTAATGGTACCACGTCGGCGCTGGCGAAGCGCGCGCTGCGCCTGCTGGGCGAGGAGGTGCCGCGGCCCATCCTGCCCAGCGTGGCCAGCTGGAAGGAAGCCGAGGTCCAGACATGGCTGCAGCAGATCGGCTTCTCCCAGTACTGCGAGAGCTTCCGGGAGCAGCAGGTGGATGGAGACCTGCTTCTGCGGCTCACGGATGAGGAACTCCAGACCGACCTGGGCATGAAGTCAGGCATCACCCGCAAGAGATTCTTTAGGGAGCTCACGGAGCTCAAGACCTTCGCCAACTACGCTACATGCGACCGCAGCAACCTGGCTGACTGGCTGGGCAGCCTGGACCCGCGCTTCCGTCAATACACGTATGGCCTGGTCAGCTGCGGCCTGGACCGCTCCCTGCTGCACCGAGTGTCGGAGCAGCAGCTCCTGGAGGACTGCGGCATCCGCCTGGGCGTGCACCGCGCCCGCATCCTCACGGCCGCCAGAGAAATGCTACACTCCCCACTGCCGTGCACCGGCTGCAAGCCCAGCGGGGACACTCCAGACGTCTTCATCAGCTACCGCCGGAACTCAGGCTCCCAGCTCGCCAGCCTCCTGAAGGTGCACCTGCAGCTGCACGGCTTCAGTGTCTTCATTGATGTGGAGAAGCTGGAAGCGGGCAAGTTCGAGGACAAGCTCATCCAGAGTATCATGGGTGCCCGCAATTTTGTGCTGGTTTTGTCGGCTGGGGCTCTGGACAAGTGCATGCAGGACCACGACTGCAAGGACTGGGTGCACAAGGAGATTGTGACTGCTCTGAACTGTGGCAAGAACATCGTGCCCGTCATTGATGGATTCCAGTGGCCAGAGCCCCAGGCCCTGCCCGAGGACATGCGGGCTGTGCTCACCTTCAATGGCATCAAGTGGTCCCACGAGTACCAGGAGGCCACCATTGAGAAGATCATCCGCTTCCTGCAGGGCCGCTCCTCCCGGGACTCATCTGCGGGCTCTGACACCAGTTTGGAGGGTGCTGCACCCCTGGGCCCCGCTTAA

Related Sequences

bmy_00105T0 Protein

Length: 712 aa      View alignments
>bmy_00105T0
MVLTLLLSAYKLCRFFAMSGPRPGAERLAVPGPDGSGCAGPWWAAGGRGPREVSPGASTEVQGALERALPELQQALSALKQAGGVRAVGASLAEVFQLVEEAWLLPAMGREVAQGLCDAIRLDGGLDLLLRLLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLAKEREPVELARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWCRRTDPPLLRHCALALANCALHGGQAAQRRMVEKRAAEWLFPLAFSEDELLRLHACLAVAVLATNKEVEREVERSGTLALVEPLVASLDPGRFARCLVDASDTSQGRGPDDLQRLVPLLDSSRLEAQCIGAFYLCAEAAIKSAIQSLKRLVSYSTNGTTSALAKRALRLLGEEVPRPILPSVASWKEAEVQTWLQQIGFSQYCESFREQQVDGDLLLRLTDEELQTDLGMKSGITRKRFFRELTELKTFANYATCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIRLGVHRARILTAAREMLHSPLPCTGCKPSGDTPDVFISYRRNSGSQLASLLKVHLQLHGFSVFIDVEKLEAGKFEDKLIQSIMGARNFVLVLSAGALDKCMQDHDCKDWVHKEIVTALNCGKNIVPVIDGFQWPEPQALPEDMRAVLTFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSDTSLEGAAPLGPA*