Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC46A1 ENSTTRG00000010182 (Bottlenosed dolphin)

Gene Details

solute carrier family 46 (folate transporter), member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009654, Bottlenosed dolphin)

Protein Percentage 89.36%
cDNA percentage 91.65%
Ka/Ks Ratio 0.45395 (Ka = 0.0715, Ks = 0.1574)

SLC46A1 ENSBTAG00000002817 (Cow)

Gene Details

Proton-coupled folate transporter

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035161, Cow)

Protein Percentage 84.4%
cDNA percentage 86.45%
Ka/Ks Ratio 0.2514 (Ka = 0.0996, Ks = 0.3963)

SLC46A1  (Minke Whale)

Gene Details

solute carrier family 46 (folate transporter), member 1

External Links

Gene match (Identifier: BACU019668, Minke Whale)

Protein Percentage 91.73%
cDNA percentage 92.91%
Ka/Ks Ratio 0.46559 (Ka = 0.06, Ks = 0.1289)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1272 bp    Location:449905..439340   Strand:-
>bmy_00106
ATGGAGGGGCGCGAGAGTTCCCAGGGCGAGCCTCGCGCCTGGCCCGCCGGGTCCGTGCTGTGCCGCGGCTGCGTGGAGCCGCTCATCTTCCTTGCCAACTTCGCCTTGGTCCTGCAGGGCCCGGTCACCACGCAGTACCTGTGGCACCGCTTCAGTGCCGACCTTGGCTACAACGGCACTCGTGACAGGGGCAGCTGCAGCAACCATAGCGTGGACCCCACTGCGCAGGAAGTGGAGACGCTTACCTCCCACTGGACCCTCTACATGAACATGGGCGGCTTCCTGGTGGGACTCTTCTCGTGCACACTGCTGGGCGCCTGGAGTGACTGTGTGGGCCGCCGCCCGCTGCTGGTGCTGGCCTCCCTCGGCCTTCTGCTCCAGACCGTGCTGTCCATCCTTGTGGTACAGCTGCAGCTCCACGTTGGCTACTTCGTGCTGGGCCGCATCCTTTGTGCCCTCCTTGGCGATTTCGGTGGCCTCCTGGCTGCTGGCTTTGCCTCCGTGGCAGATGTCAGCTCCAGCCGCACCCGTACCATCCGAATGGCCCTGCTGGAAGCGTGCATCGGGGTAGCAGGGATGCTGGCGAGTCTCATTGGTGGCAACTGGCTCCAGAAGCAGGGTTATGCCAATCCCTTCTGGCTGGCCTTGGCCTTGCTGATTGCCATGACTCTCTATGCAGCATTCTGCTTTGGTGAGACAGTGAAAGAGCCGACACGTGCCCGGCTCTTCACACTCCGTCACCACCGATCCATCGTCCAGCTCTATGTGACCCAGGCCCCGGAGAAGTCCAGGAAGCACTTAGCCCTGTACTCGTTGGCCATCTTCGTGGTGATCACTGTGCACTTTGGGGCCCAGGACATTCTGACCCTCTATGAGCTGAGCACACCCCTCTGCTGGGACTCTAGGCTGATTRGCTACGGTTCTGCGGCTCAGCACCTCCCATACCTCACCAGCCTGCTGGGCCTGAGGCTTCTGCAGTACTGCCTGGCCGACACCTGGGTGGCTGAGATCGGTCTGGCCTTCAACATCATGGGGATGGTGGTCTTTGCATTTGCTACCATTACACCYCTCATGTTCACAGGGTACGGGCTCCTCTTCCTGTCGTTGGTCGTCACGCCTATCATCCGGGCCAAGCTCTCCAGGCTGGTGAGAGAGTCAGAGCAGGGATACTGGAAAGGGCTAATCATTGCCCTGAATTCCAGCAGTTTTCCCAGAGCCCCTGATGTGCCTGGACCAGAGGACGGGGGGCAAGAGGAGCAACGTGAGCACTAA

Related Sequences

bmy_00106T0 Protein

Length: 424 aa      View alignments
>bmy_00106T0
MEGRESSQGEPRAWPAGSVLCRGCVEPLIFLANFALVLQGPVTTQYLWHRFSADLGYNGTRDRGSCSNHSVDPTAQEVETLTSHWTLYMNMGGFLVGLFSCTLLGAWSDCVGRRPLLVLASLGLLLQTVLSILVVQLQLHVGYFVLGRILCALLGDFGGLLAAGFASVADVSSSRTRTIRMALLEACIGVAGMLASLIGGNWLQKQGYANPFWLALALLIAMTLYAAFCFGETVKEPTRARLFTLRHHRSIVQLYVTQAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLCWDSRLIXYGSAAQHLPYLTSLLGLRLLQYCLADTWVAEIGLAFNIMGMVVFAFATITPLMFTGYGLLFLSLVVTPIIRAKLSRLVRESEQGYWKGLIIALNSSSFPRAPDVPGPEDGGQEEQREH*