Sequence details bmy_00108 (Coding sequence)

Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FOXN1 ENSTTRG00000004014 (Bottlenosed dolphin)

Gene Details

forkhead box N1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003767, Bottlenosed dolphin)

Protein Percentage 95.81%
cDNA percentage 97.16%
Ka/Ks Ratio 0.36612 (Ka = 0.0201, Ks = 0.0549)

FOXN1 ENSBTAG00000013095 (Cow)

Gene Details

forkhead box protein N1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017410, Cow)

Protein Percentage 94.7%
cDNA percentage 92.88%
Ka/Ks Ratio 0.11947 (Ka = 0.028, Ks = 0.2344)

Additional orthologs identified in other species via the OPTIC pipeline.

FOXN1 (Human)   Foxn1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1941 bp    Location:533106..546122   Strand:+
Raw sequence 
>bmy_00108
ATGGTGTCGCTACTCCTGCCGCAGTCTGACGTCACGCTGCCGGGCCCCACCAGACTGGAGGGCGAGCCCCAAGGGGACCACATGCAGGCACCGGGCCTCCCAGGCTCCCCTGCCCCACAGAACAAGCATGCCGGCTTCAGCTGCTCATCATTTGTGCCCGATGGCCCTCCAGAGCGGGCACCCTCACTGCCTCCACACAGCCCCTGCGCCGCGTCACCAGGTCCCGAGCAGGTCCACTGCCCAGCTGGCCCTGGCCTGGGCCCCTTCCGGCTCTCACCCTCAGACAAGTACCCCGGCTTCGGCTTTGAGGAGGGCCCGGCAAGCAGCCCCGGGCGCTTCCTCAAGGGCAGCCACGTGCCCTTCCATCCATACCAGCGGCATTTCCATGACGACGTCTTCCCTGAGGCCCAGACCGCCTTGGCCCTCACTGGACACTCCTTTAAGACCCCAGGGGCGCTGGAGGCCTTCGAGGAGATCCCCACGGATGTGGGGGAGCGTGAGGCCTTCCTGCCCGGCTTCCCAGCAGAGGCCTGGTGCAACGGGCTCCCCTACCCCAGCCGGGAGCACAGCCCCCAAGTCCTGCAGGGGTCAGAAGTCAAGGTCAAGCCACCACCTCTGGAGAGTGGTCCAGGGATGTACTGTTACCAGCCCCCCTTGCAGCATATGTACTGTCCTTCCCAGCCCCCCTTCCACCAGTACTCACCAGGTGGCAGCAGCTACCCTGTACCTTACCTGGGCTCCTCACACTATCCATACCAGCGGATCGCACCCCAGGCCAGCACTGATGGGCACCAGCCTCTCTTCCCAAAACCCATTTACTCCTACAGCATCCTCATCTTCATGGCCCTGAAGAACAGTAAAACTGGGAGCCTTCCCGTCAGCGAGATCTACAATTTTATGACGGAGCACTTTCCTTACTTCAAGACGGCGCCTGATGGCTGGAAGAATTCTGTCCGCCACAACCTGTCTCTTAACAAGTGCTTCGAGAAGGTAGAGAACAAATCAGGCAGTTCCTCTCGCAAGGGCTGCCTGTGGGCCCTCAATCCAGCCAAGATCGACAAGATGCAGGAGGAGCTGCAGAAGTGGAAGAGGAAAGACCCCATTGCCGTGCGCAAAAGCATGGCCAAGCCAGAAGAGCTGGACAGCCTCATTGGAGACAAGAGGGAGAAGCTGGGTTCCCCACTGCTCGGCTGCCCGCCCCCTGGGCTGGCAGGCTCAGGCCCCATCCGGCCCCTGGCACCTCCAGCCGGGTTCTCCCAGCCGCTGCACTCAATCCACCCAGCTCCGGGCCCCATTCCTGGCAAGAATCCCCTGCAGGACCTACTTGGGGGGCACGCACCCTCCTGCTATGGGCAGACATATTCRCACCTCTCACCGGGCCTGGCCCCTCCCGGACCTCCGCAGCCGTTGTTCCCACAGCCAGATGGGCACCTTGAGCTGCGGGCCCAGCCGGGCACCCCCCAGGACTCGCCTCTGCCTGCCCACACCCCACCCAGCCACAGTGCCAAGCTGCTGGCTGAACCTTCCCCAGCCAGGACCATACATGAAACCCTGTTGCCAGACGGAGACCTTGGCACTGACCTGGATGCCATCAATCCCTCTCTCACTGACTTCGACTTTCAGGGAAACCTGTGGGAACAGCTGAAGGATGACAGCTTGGCCCTTGACCCCTTGGTACTGGTGACCTCACCCCTGACGTCATCTTCAATGCCGCCGCCCCATCCCCCATCCCCATCCCGCTGCTTCCCCCCTGGGCCCTGTCTGGCAGAGACAGGCAGTGGGGCAGGCGACTTGACACCACCAGGCAATGGGGGCTCCGGGGCAGTAGGGGACCTGCATCTCACCACCCTCTACTCAGCCTTCATGGAGCTGGAACCCACGGCCCCTGCTGGCCCCTGTGTGTACCTCAGCCCCAGCTCCAAGCCCATGGCCCTAGCATGA

Related Sequences

bmy_00108T0 Protein

Length: 647 aa      View alignments
>bmy_00108T0
MVSLLLPQSDVTLPGPTRLEGEPQGDHMQAPGLPGSPAPQNKHAGFSCSSFVPDGPPERAPSLPPHSPCAASPGPEQVHCPAGPGLGPFRLSPSDKYPGFGFEEGPASSPGRFLKGSHVPFHPYQRHFHDDVFPEAQTALALTGHSFKTPGALEAFEEIPTDVGEREAFLPGFPAEAWCNGLPYPSREHSPQVLQGSEVKVKPPPLESGPGMYCYQPPLQHMYCPSQPPFHQYSPGGSSYPVPYLGSSHYPYQRIAPQASTDGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPAKIDKMQEELQKWKRKDPIAVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLAGSGPIRPLAPPAGFSQPLHSIHPAPGPIPGKNPLQDLLGGHAPSCYGQTYSHLSPGLAPPGPPQPLFPQPDGHLELRAQPGTPQDSPLPAHTPPSHSAKLLAEPSPARTIHETLLPDGDLGTDLDAINPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSPLTSSSMPPPHPPSPSRCFPPGPCLAETGSGAGDLTPPGNGGSGAVGDLHLTTLYSAFMELEPTAPAGPCVYLSPSSKPMALA*