Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGS ENSTTRG00000004037 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class S

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003802, Bottlenosed dolphin)

Protein Percentage 86.46%
cDNA percentage 86.89%
Ka/Ks Ratio 0.3596 (Ka = 0.0406, Ks = 0.113)

BT.49068 ENSBTAG00000013098 (Cow)

Gene Details

GPI transamidase component PIG-S

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017414, Cow)

Protein Percentage 91.3%
cDNA percentage 91.23%
Ka/Ks Ratio 0.21942 (Ka = 0.0527, Ks = 0.2404)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1869 bp    Location:572235..560646   Strand:-
>bmy_00110
ATGGCGGCCCCTGGGGCCGCAGCTACAGACCTAGGTTGCTGGGGCTCCTCCGCGTCGGGGGTGGGGCCGGCACCCGAGCCCACCTCTGGCGGCGCGTCAGTGGATCCCCCCGTGTCCCCAGAGGTGGTTCGAGGCAAGCGCGCCGCCCTCTTCTTCGCCGCGGTGGTCATCGTGCTGGGGCTGCCGCTCTGGTGGAAGACCACGGAGACCTACCGGGCCCCATTGCCTTACTCCCAGATCAGTGGGCTGAATTCCCTGCAGCTCCGGCTCATGGTGCCGGTCACTGTCGTGTTTACCCAGGAATCAGTGCCATTGGACGACCAGGAAAAGCTGCCCTTCACCGTTGTGCATGAGAGAGAGATCCCTCTGAAGTACAAATTGAAAATCAAATGCCGTTTCCAGAAGGCCTATCGGAGGGCTTTGGATCATGAGGAGGAGGCCCTGTCATTGGGCRGTATACAAGAGGCAGAAACCATGTTTGCTGAGCCATCGGAGCAAGCAGAGGGCTCCCTGACAGTGTACGTGATCTCTGAACACTCCTCACTTCTCCCTCAGGACATGATGAGCTACATTGGGCCCAAGAGGATGGCAGTTGTGCGGGGGATAATGCACCGGGAGGCCTTTAACATCATTGGCCGCCGTGTAATCCAAGTAGCCCAGGCCATGTCTTTGACTGAGGACGTGCTTGCTGCAGCCTTGGCTGACCACCTCCCAGAGGACAAGTGGAGCTCTGATAAGAGGCGGCCTCTCAAGTCCAGCTTGGGTAGGCACTCAGTGTTCCTCATCCCAGTTTTATCCTCCCTTTGCGTCCATGATGGCAACCAGCCCCATTTCAGAGGAGAACCAAGTTCAACTCAGCCAGGGGTACAGGCTGCCTTTGATCCACAGATGCCTCTGGCTTCCCTGACTCCTGTTTTTATAGGCTATGAAATCACCTTCAGTTTACTCAACCCTGACCCCAAGTCCCATGACGTCCACTGGGACATCGAGGGGGCTGTCCAGCGCTACGTGCAGCCCTTCCTGAATGCCCTCAGGGCTGTGGGCAACTTCTCTGTGGACTCCCAGGCTGCGTCTCCCTCCCTGCAAGCCATCCAGGAAAAATATGGCCACACGTGTAGGAAAGACAACAGCAGAAGATCCAGCGCTGCCTCCCTTTACCCTGTGCTCAACTTTCTGCTCTATGTTCCTGAGCTTGCCCACTCCCCCCTGTACATTCAGGACAAGGATGGGGCTCCAGTGGCCACCAACGCCTTCCACAGTCCCCGCTGGGGTGGCATTATGGTATACAATGTGGACCCCAAAGCCTACAATGGCTCGGAGCTGCCGGTGAGAGTCAAGGTGGACATGGTGCGGGTGATGGAGGTGTTCCTGGCTCAGTTGCGGCTGCTCTTTGGGATTGCTCAGCCCCAGATGCCTCCAAAATGCCTGTTTTCAGGGTCTAAGAGTGAAGGGATAATGAGCTGGGAGCTGGACCGGCTGCTCTGGGCTCGGTCAGTGGAGAACCTGGCCACAGCCACCACCACTCTCACTTCCCTGGCCCAGCTTCTGGGCAAGATCAGCAACATTGTCATCAAGGACGATGTGGCATCTGAGGTGTACAGGGCTGTAGCTGCAGTCCAGAAGGCAGCGGAGGAGTTGGCCTCTGGGCACCTGACCTCTGCCTTCGTTGCCAGCCAGGAAGCTGTGACATCCTCAGAGCGTGCCTTTTTTGATCCCTCACTCCTCCATCTCCTCTATTTCCCTGATGACCAGAAGTTTGCCATCTACATCCCACTCTTTCTGCCTATGGCTGTGCCCATCCTCTTGTCCCTGTTCAAGATCTTCCTGGAGACTCGCAAGTCCTGGAAAAAGCCTGAGAAGATAGACTGA

Related Sequences

bmy_00110T0 Protein

Length: 623 aa      View alignments
>bmy_00110T0
MAAPGAAATDLGCWGSSASGVGPAPEPTSGGASVDPPVSPEVVRGKRAALFFAAVVIVLGLPLWWKTTETYRAPLPYSQISGLNSLQLRLMVPVTVVFTQESVPLDDQEKLPFTVVHEREIPLKYKLKIKCRFQKAYRRALDHEEEALSLGXIQEAETMFAEPSEQAEGSLTVYVISEHSSLLPQDMMSYIGPKRMAVVRGIMHREAFNIIGRRVIQVAQAMSLTEDVLAAALADHLPEDKWSSDKRRPLKSSLGRHSVFLIPVLSSLCVHDGNQPHFRGEPSSTQPGVQAAFDPQMPLASLTPVFIGYEITFSLLNPDPKSHDVHWDIEGAVQRYVQPFLNALRAVGNFSVDSQAASPSLQAIQEKYGHTCRKDNSRRSSAASLYPVLNFLLYVPELAHSPLYIQDKDGAPVATNAFHSPRWGGIMVYNVDPKAYNGSELPVRVKVDMVRVMEVFLAQLRLLFGIAQPQMPPKCLFSGSKSEGIMSWELDRLLWARSVENLATATTTLTSLAQLLGKISNIVIKDDVASEVYRAVAAVQKAAEELASGHLTSAFVASQEAVTSSERAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLFKIFLETRKSWKKPEKID*