Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PROCA1 ENSTTRG00000004100 (Bottlenosed dolphin)

Gene Details

protein interacting with cyclin A1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003862, Bottlenosed dolphin)

Protein Percentage 76.83%
cDNA percentage 82.22%
Ka/Ks Ratio 1.43929 (Ka = 0.0525, Ks = 0.0365)

PROCA1 ENSBTAG00000017268 (Cow)

Gene Details

Protein PROCA1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044327, Cow)

Protein Percentage 86.76%
cDNA percentage 91.27%
Ka/Ks Ratio 0.34919 (Ka = 0.0674, Ks = 0.1931)

PROCA1  (Minke Whale)

Gene Details

protein interacting with cyclin A1

External Links

Gene match (Identifier: BACU010503, Minke Whale)

Protein Percentage 98.25%
cDNA percentage 98.83%
Ka/Ks Ratio 0.31127 (Ka = 0.0077, Ks = 0.0248)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1035 bp    Location:687823..680289   Strand:-
>bmy_00117
ATGTGGGTTAGGACGACACTGAGGATTGAAAGGTGGACTAAGGAAAAAACTGAGGACGATGCCAGCTGGTGGGACGAGAGCAGCACCGGTGAATTCAAGGACACTGACAGGTGCTGCTGGAAACACAGAAAGTGCACCGGGCACATCATCCATCCCTTCACCTCTGACTATGGCCACCACGACGTGCACCTGCACTCTATCAGCCACTGTGACTGTGATTCTAGGCTGAAGGACTGCTCAGAGAAGACATATAGCAGTTCCGGAGATGTGGGCCCAACCTGCTCCCAAGATGTGGACTCAGCCTGTTTCAACATCATCCAGTGCCCATGCTTTGAGCTCATCCCAAAGGAAGAGTGTGTGGAGCGGTGCAAAAGCTACAGGCCTGTCTCCGTGGCAGTGATCCACCATCCCATCCACCATGAGTGCGGGGCAGATGACCTAAACCAAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAAAGCAAGCCTCCCATCCCGACCCAGGTGGGGCCCCCCGCCCTCCCCACCAACACAGGTATGGGCATGGTCACAGGTACCCCTGACTTAGCAGCTCCCATCACCATCTGGCGTTCCGAAAGCCCCACAGGGAAGTCCCAGGGCAGTAAGGTGATCAAGAAGATAAAGAAGAAAAAGGAAAAAGAGAAAGACAAGGAGGAGGAGACGGACGAAAAGGCAAAGGTGAAGAAAAAAGTCAAGAAGGGCAAGTTGACTAAGAAGAAAAGCCCAGTTAAATCAGAATCACCTCCAGACTTAAACCGATCGTTAAGCCCAAGAGAGTTGGCCAGGATGTCAGAGTCCAGCCCAGACAGCTGGCAAGATCTGGAGAGTGAGGACAGTTACAATGACCCTGGGCGGGAGGAACCCTCCAATGGGGATATTGTGGAGTCTTCATCAGCCAGGAAGAGAGAGAAGAACAGGGTCCAGGCCAAGAAGCCCGGGATGAAGACCTCGCCAGTCAAGAAGGTCAACAAGAGGAAATCTCCCCCAGCATCAAACCCCAATCTCAGTTGA

Related Sequences

bmy_00117T0 Protein

Length: 345 aa      View alignments
>bmy_00117T0
MWVRTTLRIERWTKEKTEDDASWWDESSTGEFKDTDRCCWKHRKCTGHIIHPFTSDYGHHDVHLHSISHCDCDSRLKDCSEKTYSSSGDVGPTCSQDVDSACFNIIQCPCFELIPKEECVERCKSYRPVSVAVIHHPIHHECGADDLNQEEEEEEEEEEEESKPPIPTQVGPPALPTNTGMGMVTGTPDLAAPITIWRSESPTGKSQGSKVIKKIKKKKEKEKDKEEETDEKAKVKKKVKKGKLTKKKSPVKSESPPDLNRSLSPRELARMSESSPDSWQDLESEDSYNDPGREEPSNGDIVESSSARKREKNRVQAKKPGMKTSPVKKVNKRKSPPASNPNLS*