Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIPOX ENSTTRG00000004112 (Bottlenosed dolphin)

Gene Details

pipecolic acid oxidase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003874, Bottlenosed dolphin)

Protein Percentage 76.35%
cDNA percentage 79.43%
Ka/Ks Ratio 0.57347 (Ka = 0.1297, Ks = 0.2261)

PIPOX ENSBTAG00000007946 (Cow)

Gene Details

Peroxisomal sarcosine oxidase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010444, Cow)

Protein Percentage 79.74%
cDNA percentage 82.14%
Ka/Ks Ratio 0.33436 (Ka = 0.1462, Ks = 0.4371)

PIPOX  (Minke Whale)

Gene Details

pipecolic acid oxidase

External Links

Gene match (Identifier: BACU010493, Minke Whale)

Protein Percentage 85.64%
cDNA percentage 88.03%
Ka/Ks Ratio 0.53678 (Ka = 0.1113, Ks = 0.2073)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1245 bp    Location:957696..970141   Strand:+
>bmy_00127
ATGGCTGCTCAGAAAGATCTCTATGACGCCATTGTGATTGGGGCAGGCATCCAGGGCTGCTTCACTGCGTACCACCTGGCCAAACACAGGAAGAGGGTCCTCCTGCTGGAGCAGTTCTTCCTCCCGCACTCCCGAGGAAGTTCCCATGGGCAGAGCCRGATAATCCAAAGGGCGTACGCTGAAGACTTCTACACCCAGATGATGGCTGAGTGCTACCAGATATGGGCCCAGCTGGAGCATGAGGCAGGAACCCAATTACACAGGCAGACTGGACTACTGCTGCTGGGAATGAAGGAGAATGCAGAATTAAAGATAATCCAGGCTACTCTGTCTAGGCAGGGAGTGGAACACCAGTGTCTTCCATCTGAGGAACTGAAGCAACGTTTCCCCAATATTCGGTTGGCCAGGGGAGAAGTGGGGCTCTTGGAAAAGTCTGGAGGAGTTCTCTATGCTGACAAGGCACTCAGAGCCCTTCAGGTGATATCCTGCAGCATTAGGGGCACTGCAGCTCCTGCTCTGGGCATCCTGGGTCCCCATCAGCCATCCCCTGACCCCCAGTTGGATGAGAGCCTTTGCCCTGCCAGCTTTAGTCTTGACTTTTTGGACTGGGCAGTTTTATATACCCTGCTAGGCCTCGACAATATGGGAGAGGAGGATGCAATTCGACAGCTAGGAGGCATAGTGCATGATGGAGAGAAGGTGATGGAGATAAAACCAGGGCTACTGGTTGTGACCCTGCGGATCAATGTGTGTTACTGGCGAGAGAAGGTTCCCGGAAGCTATGGTGTGTCCCAGGCCTTTCCATGCTTCCTGGGCTTCAGCCTGGCTCCTTACCACATCTATGGATTGCCCTCCGGAGAGTACCCAGGGCTGATGAAGGTCTGCTATCACCACGGCAACAATGCAGATCCTGAGGAGCGGGACTGCCCTGCAGCTTTCTCAGACATCCAAGACGTCCACATCCTGAGCTGCTTTGTCAGAGATCACTTACCTAACTTAGAGCCTGAGCCTGCTGTTATGGAGCACTGCATGTACACGAACACCCCTGATGAGCACTTCATTCTTGATCGACACCCAAAGTACGATAACATTGTCATTGGTGCTGGATTCTCTGGGCATGGGTTTAAGCTGTCCCCTGTTGTGGGGAAGATCCTGTATGAATTAAGCATGAAATTAATGCCATCCTATGACTTGACACCTTTTCGAATCAGCCGCTTCCCCTGCCTCGGCAAAGCCCACATGTGA

Related Sequences

bmy_00127T0 Protein

Length: 415 aa      View alignments
>bmy_00127T0
MAAQKDLYDAIVIGAGIQGCFTAYHLAKHRKRVLLLEQFFLPHSRGSSHGQSXIIQRAYAEDFYTQMMAECYQIWAQLEHEAGTQLHRQTGLLLLGMKENAELKIIQATLSRQGVEHQCLPSEELKQRFPNIRLARGEVGLLEKSGGVLYADKALRALQVISCSIRGTAAPALGILGPHQPSPDPQLDESLCPASFSLDFLDWAVLYTLLGLDNMGEEDAIRQLGGIVHDGEKVMEIKPGLLVVTLRINVCYWREKVPGSYGVSQAFPCFLGFSLAPYHIYGLPSGEYPGLMKVCYHHGNNADPEERDCPAAFSDIQDVHILSCFVRDHLPNLEPEPAVMEHCMYTNTPDEHFILDRHPKYDNIVIGAGFSGHGFKLSPVVGKILYELSMKLMPSYDLTPFRISRFPCLGKAHM*