Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMYD4 ENSTTRG00000001168 (Bottlenosed dolphin)

Gene Details

SET and MYND domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001098, Bottlenosed dolphin)

Protein Percentage 86.76%
cDNA percentage 90.13%
Ka/Ks Ratio 0.55032 (Ka = 0.089, Ks = 0.1617)

SMYD4 ENSBTAG00000009708 (Cow)

Gene Details

SET and MYND domain-containing protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012805, Cow)

Protein Percentage 76.01%
cDNA percentage 82.48%
Ka/Ks Ratio 0.58653 (Ka = 0.1735, Ks = 0.2957)

SMYD4  (Minke Whale)

Gene Details

SET and MYND domain containing 4

External Links

Gene match (Identifier: BACU006973, Minke Whale)

Protein Percentage 88.28%
cDNA percentage 91.39%
Ka/Ks Ratio 0.73783 (Ka = 0.0849, Ks = 0.115)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location:3451461..3438523   Strand:-
>bmy_00179
ATGCTAGTTTCCATGTATACCTTTAACCGGTGCATTGTTCTGCAGGGAGTATCGCATTCAAGGCCCAACTCTGAGGACATTTCACTGTGTTACGCCAATCGCTCTGCAGCCCTCTTCCACCTGGGTCAGTATGAGACATGCCTTAAAGACATCGTCAGAGCACAGACGCATGGATATCCAGAGGGATTGCAACCCAAGTTGCTGTTGCGTAAGGCGGAGTGTCTGGTGACCCTGGGGAGACCACACGAGGCAAGCCAGACCATCAGTGATCTTGAAAGTAACTTTGCTGCCAAACCAACCCTAGCAGCTTCCCAATTTCAGATTCTGCAGAGAACCCTCTGTCGTCTGAAAGTAAAGGTACAAGAAAAGGAGAATCTCACAGAAACCTCCCCAACAGCTCTAACCAAAGCCTTTGAGGATATGGACCTAAGGGAAGAGAATGAACAAATTTCCAACACATCATCATCTGTCAGCTTATGTACGGACCCTTTAAAAGGCCGCTATCTGGTTGCCACAAAAGATATTCTCCCAGGAGAGCTTCTGGTGAAAGAGGATGCTTTTGTGAGTGTCCTTAACCCAGGAGAAATGCCACCATGGCATCATGGCCTCGAGAGCAAGTGGGATACCAGAGCTACCAATGCGGACCTCTACTGTCACCGATGTTTGAAGCACACTTTGGCCCCAGTTCCCTGTGATGGATGCAGTTATGCCAAGTATTGCAGCCAAGAGTGTTTGCAGCAGGCCTGGGATCTCTACCATAGTATAGAGTGTTCTCTAGGGGGGCTGCTTCTCACACTGGGTGTTTTTTGCCACATTGCCCTGAGGTCGACTCTTTTAGCTAGATTTGAGGAGGCTRGCAAAGTCATAAATAAGCTTTGTGGTGAGATTACTAACAGGGATATCTGTTTACCTGAAAGCAAGAATCTGGCGCAAATACTCAGTTATGACCTGGGAGGGGAGAGTAAAAAAAAGGGGAAAACAGTTGAGACCCCAATTCCTGGGTGTGATATTAACGGGAAGTATGAAAATAATTATAATGCTGTCTTCAGCCTTTTACCCCATGCCAGAAACCATAGCCCTGTGCACAAATTCCTCTGTGCTCTGAGTGTTTCTGCACTGTGCAGGCAGCTCGAAGCAGCCAGTTTACAGGCCTTCACAACAGGTCTGAAATCGTCTAAGCTGAAAGCAGCAGCGGCTCCTGTGTTGTATCCAGAGTTGAATATTTGGGGAGTGGCCATGCTGAGACACATGTTACAGCTACAGTGTAATGCTCAGGCGATAACAACCATACAGCAAACAGGATCTGAAGAGAACCTCATTACCGACAGCAGGCAGGTGCGCCTTGCCACGGGGCTGTTCCCCGTCGTCAGCCTCCTGAACCATTCCTGCAGCCCCAATACCAGCGTGTCCTTCACTAGCACCGTCGCCACCGTTCGGGCATCTCAGCAGATTGGAAAAGGGCAGGAGATTCTCCACTGCTATGGTGAGCCATCCATCCTCCCTCCTGTCCACCTTTCTCCAGCAGAAAAGGACGGGGTGAATTCGCCTGAGCAAGCCACAGGGCAGGTGCCTCACCTGTGCAGAGTCTGCATCCTGGCAGAGGCAGTGCATACTTACGGGGAAGCAAAGCCCCCTCACTAG

Related Sequences

bmy_00179T0 Protein

Length: 547 aa      View alignments
>bmy_00179T0
MLVSMYTFNRCIVLQGVSHSRPNSEDISLCYANRSAALFHLGQYETCLKDIVRAQTHGYPEGLQPKLLLRKAECLVTLGRPHEASQTISDLESNFAAKPTLAASQFQILQRTLCRLKVKVQEKENLTETSPTALTKAFEDMDLREENEQISNTSSSVSLCTDPLKGRYLVATKDILPGELLVKEDAFVSVLNPGEMPPWHHGLESKWDTRATNADLYCHRCLKHTLAPVPCDGCSYAKYCSQECLQQAWDLYHSIECSLGGLLLTLGVFCHIALRSTLLARFEEAXKVINKLCGEITNRDICLPESKNLAQILSYDLGGESKKKGKTVETPIPGCDINGKYENNYNAVFSLLPHARNHSPVHKFLCALSVSALCRQLEAASLQAFTTGLKSSKLKAAAAPVLYPELNIWGVAMLRHMLQLQCNAQAITTIQQTGSEENLITDSRQVRLATGLFPVVSLLNHSCSPNTSVSFTSTVATVRASQQIGKGQEILHCYGEPSILPPVHLSPAEKDGVNSPEQATGQVPHLCRVCILAEAVHTYGEAKPPH*