Sequence details bmy_00201 (Coding sequence)

Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHPK ENSTTRG00000001205 (Bottlenosed dolphin)

Gene Details

sedoheptulokinase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001130, Bottlenosed dolphin)

Protein Percentage 96.6%
cDNA percentage 96.83%
Ka/Ks Ratio 0.29377 (Ka = 0.0195, Ks = 0.0665)

CARKL ENSBTAG00000000829 (Cow)

Gene Details

sedoheptulokinase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001095, Cow)

Protein Percentage 91.16%
cDNA percentage 91.38%
Ka/Ks Ratio 0.20033 (Ka = 0.0475, Ks = 0.2369)

Additional orthologs identified in other species via the OPTIC pipeline.

SHPK (Human)   Shpk (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1458 bp    Location:4618424..4598395   Strand:-
Raw sequence 
>bmy_00201
ATGGGAAGAAGAGAATTCGTCGTGTTGCGCGTGGCTGGAAAGATTGGCAGGCGAGGCCCCGCCTCGGCGCCTCTGTCCCGGTTGAAGTGTGCTGGAAGGGGCGCCCCGGCCCCAGACTCAATCGCTGTCATGGCTGCACGGTCTGTCACTCTCGGCATCGACCTGGGCACCACGTCTGTGAAGGCGGCCCTGGTGGAGGCCGCGCGCGGCGACCCTTCCGGGTTCGTGGTACTGGCGAGCTGTGCCCGGCCTGCGCGGGCCGAGACGGCGGCCCAGAGCGCGGCGGCGGGGCCCCAGAGAATCAGTGATTCCGATTCCCCTGGGCCAAGTTGTGAATGGACAAAGGCAGGGGCTGCCCCTGTGTTCGAGCCCAGAGCCGTGAGCCACTTGGTAACGTGGCAGGATGGCCGGTGTGGCAGCAAGTTCCTGGCTTCTCTGCCCCAGCCAGAGTCTCATCTCAGTGTGGCCACGGGGTTTGGCTGTGCAACCATCTTCTGGCTTTTGAAAAATAGCCCAGAGTTCCTGAAGTCCTACGATGCAGCTGGCACTATCCATGACTATGTGGTTGCCATGCTGTGTGGCTTGACAAGACCCCTGATGTCCGACCAGAATGCCGCTAGCTGGGGATATTTCAACACCAGGAGCCAAAGCTGGAACTTGGAGATACTGAGGGACGCAGGCTTTCCCGTCCACCTGCTCCCRGACGTCACCGAGCCTGGCAACGTGGCAGGCAGAACTTCCCAGGCCTGGTTTGAGATCCCAAAGGGGACACAGGTGGGCGTGGCCTTGGGGGATTTGCAGGCCTCTGTCTATTCCTGTATGGCCCAAAGGACAGATGCAGTTCTCAACATCAGCACCTCGGTGCAGCTGGTAGCCTCCATGCCTTCAGGATTCCAGCCAGTGCAGACTCCAGACCCTGCAGCTCCAGTYGCCTACTTCCCGTACTTTGACAGGACCTACCTGGCGGTGGCAGCATCACTCAATGGGGGCAACGTGCTGGCCATGTTCGTCCACATGCTGGTCCAGTGGATGGCGGATCTAGCAGGCCTGGAGGTTGAAGAATCCACTGTGTACTCACGCATGATCCAGGCTGCTGCACAGCAGAGAGACACCTGCCTAACCATCACTCCAACAGTGCTGGGCGAGAGGCACCTGCCAGACCAGCTGGCCTCAGTGACCAGAATCTCCTCCTCTGACCTCTCCCTGGGGCACGTGACCCGGGCCCTGTGCAGAGGCATCGTTCAGAACCTGCACTCAATGCTTCCTTTTCAGCAGCTCCAAGAGTGGGGCGTGGAGCGGGTGATCGGCAGTGGGAGTGCGCTGTCCAGGAACGAGGTGCTGAAGCAGGAGGTGCAGAGGGCTTTCCCTTTCCCAGTGTCCTATGGGCAGGATGTAGACGCAGCTGTAGGGGCCGCTCTGGTTATGCTCCAGAGAAACCTTAACCAGCAGGAGTATTAG

Related Sequences

bmy_00201T0 Protein

Length: 486 aa      View alignments
>bmy_00201T0
MGRREFVVLRVAGKIGRRGPASAPLSRLKCAGRGAPAPDSIAVMAARSVTLGIDLGTTSVKAALVEAARGDPSGFVVLASCARPARAETAAQSAAAGPQRISDSDSPGPSCEWTKAGAAPVFEPRAVSHLVTWQDGRCGSKFLASLPQPESHLSVATGFGCATIFWLLKNSPEFLKSYDAAGTIHDYVVAMLCGLTRPLMSDQNAASWGYFNTRSQSWNLEILRDAGFPVHLLPDVTEPGNVAGRTSQAWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQLVASMPSGFQPVQTPDPAAPVAYFPYFDRTYLAVAASLNGGNVLAMFVHMLVQWMADLAGLEVEESTVYSRMIQAAAQQRDTCLTITPTVLGERHLPDQLASVTRISSSDLSLGHVTRALCRGIVQNLHSMLPFQQLQEWGVERVIGSGSALSRNEVLKQEVQRAFPFPVSYGQDVDAAVGAALVMLQRNLNQQEY*