Part of scaffold_1 (Scaffold)

For more information consult the page for scaffold_1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC13A5 ENSTTRG00000012082 (Bottlenosed dolphin)

Gene Details

solute carrier family 13 (sodium-dependent citrate transporter), member 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011458, Bottlenosed dolphin)

Protein Percentage 98.17%
cDNA percentage 98.6%
Ka/Ks Ratio 0.28652 (Ka = 0.0087, Ks = 0.0303)

SLC13A5 ENSBTAG00000004680 (Cow)

Gene Details

solute carrier family 13 member 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006144, Cow)

Protein Percentage 91.21%
cDNA percentage 92.12%
Ka/Ks Ratio 0.15146 (Ka = 0.0413, Ks = 0.2723)

SLC13A5  (Minke Whale)

Gene Details

solute carrier family 13 (sodium-dependent citrate transporter), member 5

External Links

Gene match (Identifier: BACU006938, Minke Whale)

Protein Percentage 93.57%
cDNA percentage 94.9%
Ka/Ks Ratio 0.48409 (Ka = 0.0433, Ks = 0.0893)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1728 bp    Location:5534383..5559093   Strand:+
>bmy_00223
ATGGCCTCCGCACTGAGCTATGTCTCCAAGTTCAAGTCCTTCGTGATCTTGTTCGTCACCCCGATTCTGCTGCTGCCACTCATCATTCTGATGCCCGCCAAGTCCATGCCCTGCTGTCCCGAGCGTTCTGGGGTGGGGAGCGGGGCGGCAGCAGCTCGCCAGGCCTCAGTGCCGTCTCTTCAGTTTGTCAGGTGTGCCTATGTCATCATCCTCATGGCGATTTACTGGTGCACAGAAGTCATCCCTCTGGCTGTCACTGCCCTCATGCCTGCCTTGTTTTTCCCGCTCTTCAAGATTCTGGACTCCAAACAGGTGTGCGTCCAGTACATGAAGGACACCAACATGCTGTTTCTGGGCGGCCTCATCGTGGCTGTGGCCGTGGAGCACTGGAACCTGCATAAGAGGATYGCCCTGCGCACGCTCCTCTGGGTGGGGGCCAAGCCTGCCCAGCTGATGCTGGGCTTCATGGGCGTCACGGCCTTTCTCTCCATGTGGATCAGCAACACGGCCACCACGGCCATGATGGTGCCCCTTGTGGAGGCCGTGCTGCGGCAGATGGAGGCCATGAGCGCAGCCACCGAGGCCAGCCTCGGGGCTCTGGAGCTGGCAGACAAGGGCAAGGCCGGCGAGCTGCCAGGGAGCCAAGCGAATTTTGAAGGTCCCTCCATGAGGCAGCGGGAGGTCGACAGGAAGAACAYATGCAAGGCCATGACCCTGTGCGTGTGCTACGCAGCCAGCATCGGAGGCACTGCCACCCTGACCGGCACGGGACCCAACGTGGTGCTCCTGGGCCAGATGCAAGAATTGTTTCCTGACAGCAAAGACGTCGTGAACTTCGCCTCTTGGTTTGGATTTGCCTTCCCTAATATGCTGATCATGCTGCTGCTCTCCTGGCTGTGGCTCCGGTTTATTTACATGAGATTCAATATTAAAGAGTCCTGGGGCTGCGGGCTGGAGAAGAAGAGTGAGGAGAAGGCTGCCCACGAGGTGCTGTGGGCGGAGTACAGGAAGCTGGGGCCCCTCTCCTTCGCTGAGGTCAACGTCCTTCTCTGCTTCTTCCTGCTGGTCGGCCTGTGGTTCTCCCGGGACCCCGGCTTCATGCCCGGCTGGCTGTCAATCGCCTGGGTGGAGGGCAAGACAAAGTATGCCTCCGATGCCACAGTGGCCATCTTTGTGGCCATCTTGCTATTCATTGTGCCTTCGCAGAAGCCCAAGTTCAACTTCTGCAGCCAGACTGAGGAAGTACCCTGGGGCATCGTGCTGCTCCTGGGGGGTGGCTTTGCTCTGGCTAAAGGATGCGAGGCCTCGGGGCTGTCAGAATGGATGGGGAAGCAGATGGAGCCCTTGCATGCCATGTCCCCAGCAGCCATCACCTTGATCTTGTCCACACTCATTGCTGTGCTCACTGAATGCACAAGCAACGTGGCTACCACCACCCTGTTCCTGCCCATCTTTGCCTCCATGTCACGTTCCATTGGCCTCAACCCGCTGTACATCATGATCCCCTGTACCCTGACTTCATCCTTTGCCTTCATGTTGCCCGTGGCCACCCCACCTAATGCCATCGTGTTTTCCTATGGACACCTCAAGGTTTCCGACATGATGAAAACAGGACTAATAATGAACGTCATTGGAATCACCTGTGTATTTTTGGCCATCAACACCTGGGGACGGGTCATATTTGACTTGGACAGTTTCCCTGACTGGGCTAATGTGACAGCACATTGA

Related Sequences

bmy_00223T0 Protein

Length: 576 aa      View alignments
>bmy_00223T0
MASALSYVSKFKSFVILFVTPILLLPLIILMPAKSMPCCPERSGVGSGAAAARQASVPSLQFVRCAYVIILMAIYWCTEVIPLAVTALMPALFFPLFKILDSKQVCVQYMKDTNMLFLGGLIVAVAVEHWNLHKRIALRTLLWVGAKPAQLMLGFMGVTAFLSMWISNTATTAMMVPLVEAVLRQMEAMSAATEASLGALELADKGKAGELPGSQANFEGPSMRQREVDRKNXCKAMTLCVCYAASIGGTATLTGTGPNVVLLGQMQELFPDSKDVVNFASWFGFAFPNMLIMLLLSWLWLRFIYMRFNIKESWGCGLEKKSEEKAAHEVLWAEYRKLGPLSFAEVNVLLCFFLLVGLWFSRDPGFMPGWLSIAWVEGKTKYASDATVAIFVAILLFIVPSQKPKFNFCSQTEEVPWGIVLLLGGGFALAKGCEASGLSEWMGKQMEPLHAMSPAAITLILSTLIAVLTECTSNVATTTLFLPIFASMSRSIGLNPLYIMIPCTLTSSFAFMLPVATPPNAIVFSYGHLKVSDMMKTGLIMNVIGITCVFLAINTWGRVIFDLDSFPDWANVTAH*