Sequence details bmy_00684 (Coding sequence)

Part of scaffold_12 (Scaffold)

For more information consult the page for scaffold_12 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATXN1 ENSTTRG00000014678 (Bottlenosed dolphin)

Gene Details

ataxin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013915, Bottlenosed dolphin)

Protein Percentage 97.6%
cDNA percentage 97.02%
Ka/Ks Ratio 0.10787 (Ka = 0.0134, Ks = 0.1241)

ATXN1 ENSBTAG00000019675 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042169, Cow)

Protein Percentage 89.84%
cDNA percentage 89.27%
Ka/Ks Ratio 0.0806 (Ka = 0.0501, Ks = 0.6219)

Additional orthologs identified in other species via the OPTIC pipeline.

ATXN1 (Human)   Atxn1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1941 bp    Location:2861475..2857581   Strand:-
Raw sequence 
>bmy_00684
ATGAAATCCAACCAAGAGCGCAGTAACGAATGCCTGCCTCCCAAGAAGCGCGAGATCCCCGCCACCAGCCGGCCCTCGGAGGACAAGGCCACGGCTGTGCCCAGCGACAACCACCGCGCGGAGGGCGTGGCATGGCTCCCGGGCCACGCGGGCGGCCGGGGCCACGCGGGCGGGCGGCTCGGGCCGGCGGGGCCCCCGGCAGAGCTCGGTTTACAGCAGGGAATAGGTTTACACAAAGCGCTGTCCGCGGGGCTGGACTACTCCCCGCCCAGCGCGCCCCGGTCCGTCCCGGCGACCACGACGATGCCCGCGTACCCGCCCCCGCAGTCCGGGGCCCCGGTGTCGCCCGTGCAGTACGCCCACCTGCCGCACACCTTACAGTTCATCGGCTCTTCCCAGTACGGCGGGCCCTACGCCGGCTTCATCCCTTCTCAGCTGATCTCCCCCACGGCCAGCCCCGTCACCAGCGCGGTGGCCTCGGCCGCGGGGGCCGCCACTCCATCCCAGCGCTCCCAGCTGGAGGCCTATTCTACCCTGCTGGCCAACATGGGCGGCCTGAGCCAAGCCTCGGGACACAAGTCTGAGCTGCAGCAGCAGCACTTGGGCAGGACCGCGGGGCTCCTGCCCCCCGGGTCCCCACCACCCACCCAGCAGAACCAGTACATGCACATCTCCAGCTCGCCGCAGAGCGCCGCGCGCCCGGCCTCCCCGCCGGCCATCCCCGTCCACCTGCACCCGCACCAGACGATGATCCCGCACACGCTCACCCTGGGGCCCTCCCCGCAGGTCGTCGTGCAGTACACCGACTCCGGCAGCCACTTCGTCACCCGCGAGGCCACCAAGAAAGCCGAGAGCAGCCGGCTGCAGCAGGGCGTGCAGGCCAAGGAGATCCTGAACGGGGAGATGGAGAAGGGCCGCAGGTACGGGGCGCCCACCGCAGCCGACCTGGGCCTGGTGAAGGCGGGTGGCAAGGCCGTTCCCCACCCGTACGAGTCCAGGCACGTGGTGGTCCACCCCAGCCCTGCCGACTACGGCGGCCGCGACTCCTCCGGGGTGCGGGCCTCTGTGATGGTCCTGCCCAACAGTAGCACCCCTGCCGCCGACCTGGAGGTGCAGCAGGTCACCCACCGAGAGGCCTCCCCCTCCGCCCTCAACGACAAAAGCGGCCTGCACCTAGGGAAGCCCGGGCACCGCTCCTACGCGCTGTCTCCCCAGCAGGCCCTGGGCCCCGAAGGCGTGAAGGCCGCCGCCGTCGCCACGCTGTCCCCCCACACGGTCATTCAGACCACACACAGTGCTTCGGAGCCCCTCCCGGTTGGACTGCCGGCCACAGCCTTCTACGCAGGGACTCAGCCGCCCGTGATCGGCTACCTGAGCAGCCAGCAGCAAGCGATCACCTATGCCGGCGGCCTGCCCCCGCACCTGGTCCTCCCCGGCACCCAGCCCCTGCTCATCCCTGTGGGCAGTGCTGACATGGAGGGGTCGGGTGCGGCCTCGGCCATCGTCACGTCGTCGCCCCAGTTTGCTGCAGTGCCTCACACGTTCGTCACCACCGCCCTTCCCAAGAGCGAGAACTTCAGCCCCGAGGCCCTGGTCACCCAGGCCGCCTACCCAGCCATGGTGCAGGCCCAGATCCACCTGCCCGTGGTGCAGTCGGTGGCATCCCCTGCAGCCGCACCCCCTACGCTGCCTCCCTACTTCATGAAAGGCTCCATCATCCAGCTGGCCAACGGGGAGCTGAAGAAAGTGGAGGACTTAAAGACGGAAGACTTCATCCAGAGCGCAGAGATCAGCAACGACCTGAAGATCGACTCCAGCACGGTGGAGCGGATCGAGGACAGCCACAACCCGGGCGTCGCCGTGATACAGTTCGCTGTCGGGGATCACCGAGCACAGGTAACGTTCATCCAGATCACACAGCACTACTGTGAAGAGAGGTAG

Related Sequences

bmy_00684T0 Protein

Length: 647 aa      View alignments
>bmy_00684T0
MKSNQERSNECLPPKKREIPATSRPSEDKATAVPSDNHRAEGVAWLPGHAGGRGHAGGRLGPAGPPAELGLQQGIGLHKALSAGLDYSPPSAPRSVPATTTMPAYPPPQSGAPVSPVQYAHLPHTLQFIGSSQYGGPYAGFIPSQLISPTASPVTSAVASAAGAATPSQRSQLEAYSTLLANMGGLSQASGHKSELQQQHLGRTAGLLPPGSPPPTQQNQYMHISSSPQSAARPASPPAIPVHLHPHQTMIPHTLTLGPSPQVVVQYTDSGSHFVTREATKKAESSRLQQGVQAKEILNGEMEKGRRYGAPTAADLGLVKAGGKAVPHPYESRHVVVHPSPADYGGRDSSGVRASVMVLPNSSTPAADLEVQQVTHREASPSALNDKSGLHLGKPGHRSYALSPQQALGPEGVKAAAVATLSPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSSQQQAITYAGGLPPHLVLPGTQPLLIPVGSADMEGSGAASAIVTSSPQFAAVPHTFVTTALPKSENFSPEALVTQAAYPAMVQAQIHLPVVQSVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHNPGVAVIQFAVGDHRAQVTFIQITQHYCEER*