Sequence detailsbmy_03282 (Coding sequence)

Part of scaffold_94 (SequenceType object (1))

For more information consult the page for scaffold_94 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMPRSS4ENSTTRG00000017255 (Bottlenosed dolphin)

Gene Details

transmembrane protease, serine 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016357, Bottlenosed dolphin)

Protein Percentage 80.7%
cDNA percentage 85.13%
Ka/Ks Ratio 0.60521 (Ka = 0.0847, Ks = 0.1399)

TMPRSS4ENSBTAG00000021518 (Cow)

Gene Details

transmembrane protease serine 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028678, Cow)

Protein Percentage 77.4%
cDNA percentage 85.18%
Ka/Ks Ratio 0.48343 (Ka = 0.1391, Ks = 0.2877)

TMPRSS4 (Minke Whale)

Gene Details

transmembrane protease, serine 4

External Links

Gene match (Identifier: BACU017310, Minke Whale)

Protein Percentage 92.64%
cDNA percentage 94.32%
Ka/Ks Ratio 0.55804 (Ka = 0.0512, Ks = 0.0917)

Additional orthologs identified in other species via the OPTIC pipeline.

TMPRSS4 (Human)   Tmprss4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1305 bp    Location:1087408..1044450   Strand:-
Raw sequence 
>bmy_03282
CTCCTCCTTGCACCCGGCACTGAGCTTTTGCACCTCTTCAGGGATCTGTTTGCAATTCCATCCCTGAAGAGTTGCAAAAGCTCAGTACCAGCAGGAGAAAAGTGGGCACTGGACCTCCCCTGCCAGGCTCTTCCCCTCCCCCTCACAGATGTCAGCCCCCTGCGCAAATCCCGCACCTCCCTGGAGACCTTCAGAAAGGTGGGGATCCCCATCATCGCAGCACTGCTGAGCCTGCTGACCATCACGGCCGTGGCTGTCCTCATCAAGGTGGTTCTGGACAATTACTTCCTCTGCGGGCAGCCCCTCCACTTCATCCGGAGGGGGCAGGTGTGTGATGGCCAGCAGGACTGTGCCTCAGGAGAGGATGAGCAGCACTGTGTCAAGAAATTCCCCGATGGACCTCCAGTGACAGTCCGCCTCTCCAGGGACCGATCCACCCTGCAGGTGCTGGACCTGACCACAAAGAACTGGGCCTCCGCCTGTTTCGACAACTTCACAGAAGCTCTGGCCAAGACAGCCTGTGGGCAGATGGGCTATGACAGCAAACCCACCTTCAGAGCCGTGGAGATTGGCCCAGCCCAAGACCTGGATGTTGTCAAAATCACAGAGAACATGCAGGAGCTTCAGGTGCGAAACTCAAATGGCCCCTGTCTCTCAGGCTCCCTGGTTTCCCTGCAGTGCATTGCCTGCGGAGAGAGCCTGAAGGTCCCTCGGGTGGTGGGTGGGGAGATGGCCTCTGTGGATTCTTGGCCTTGGCAGGTCAGCATCCAGTATGACAAACGACACATCTGTGGAGGGAGCATCCTGGACCGGCACTGGATCCTCACGGCAGCCCACTGCTTCCGACCTGAACCGCACTGTCTCCGTCCCCAGGAAGCATCTCGATGTGTCCAACTGGAAGGCACAGTCAGGCCCATCTGCCTGCCCTTCTCTGACGAGGAGCTCACTCCAGCCACCCCACTCTGGGTCAGCGGATGGGGCTTTACAGAACAGAATGGAGGGAAGATATCTGACATACTGCTGCAGGCATCTGTCCAGCTCATTGACAGCACTCGGTGCAATGCAGAGGATGCGTACCAGGGGGAGGTCACCGAGAAGATGCTGTGTGCAGGCATCCCGGAGGGCGGTGTGGACACCTGCCAGGGTGACAGCGGTGGGCCTCTGATGTATCTCTCTGACCGGTGGCAAGTAGTGGGCATCGTGAGCTGGGGCCATGGCTGTGGGGAGCCGAATACCCCGGGAGTGTACACCAAGGCCACAGCCTATCTCAACTGGATCTACAATGTCCGGAAGTCTGATCCATGA

Related Sequences

bmy_03282T0 SequenceType object (3)

Length: 435 aa      View alignments
>bmy_03282T0
LLLAPGTELLHLFRDLFAIPSLKSCKSSVPAGEKWALDLPCQALPLPLTDVSPLRKSRTSLETFRKVGIPIIAALLSLLTITAVAVLIKVVLDNYFLCGQPLHFIRRGQVCDGQQDCASGEDEQHCVKKFPDGPPVTVRLSRDRSTLQVLDLTTKNWASACFDNFTEALAKTACGQMGYDSKPTFRAVEIGPAQDLDVVKITENMQELQVRNSNGPCLSGSLVSLQCIACGESLKVPRVVGGEMASVDSWPWQVSIQYDKRHICGGSILDRHWILTAAHCFRPEPHCLRPQEASRCVQLEGTVRPICLPFSDEELTPATPLWVSGWGFTEQNGGKISDILLQASVQLIDSTRCNAEDAYQGEVTEKMLCAGIPEGGVDTCQGDSGGPLMYLSDRWQVVGIVSWGHGCGEPNTPGVYTKATAYLNWIYNVRKSDP*