Part of scaffold_101 (Scaffold)

For more information consult the page for scaffold_101 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPTLC2 ENSTTRG00000009323 (Bottlenosed dolphin)

Gene Details

serine palmitoyltransferase, long chain base subunit 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008841, Bottlenosed dolphin)

Protein Percentage 77.68%
cDNA percentage 79.28%
Ka/Ks Ratio 0.71926 (Ka = 0.0698, Ks = 0.097)

SPTLC2 ENSBTAG00000020480 (Cow)

Gene Details

serine palmitoyltransferase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027289, Cow)

Protein Percentage 91.81%
cDNA percentage 89.74%
Ka/Ks Ratio 0.19824 (Ka = 0.0576, Ks = 0.2904)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1065 bp    Location:319888..349877   Strand:+
>bmy_03483
ATGCAACAGAAAGAGAAGAACAAAAGTATTTTCACCATTTTTTGGCAGGACTTTGTGTCATTGTATCAGGATTTCGAAAACTTCTATACAAGGAACCTCTACATGAGGATTAGAGACAACTGGAATCGGCCCATCTGCAGTGTGCCTGGGGCCAGGGTGGACATCATGGAGAGACAGTCTCATGATTACAACTGGTCGTTCAAGTACACAGGGAATGTAATTAAAGATGTTATAAACATGGGTTCCTACAACTATCTTGGGTTTGCACGGAATACTGGACCATGTCAAGAGGCAGCTGCCAAAGTCCTGGAGGAATATGGAGTTGGAGTGTGCAGCACTCGGCAGGAAATTGGAAACCTGGACAAGCATGAAGAACTAGAGAAGCTTGTGGCAAGTTTCTTGGGAGTGGAAGCTGCTATGACATATGGCATGGGATTTGCAACAAACTCAATGAACATTCCTGCTCTTGTTAGCAAAGGTTGCCTGATTCTGAGTGATGAACTGAACCATGCATCACTGGTTCTAGGAGCCAGACTCTCAGGAGCAACCATTCGAGTCTTCAAACACAACAATATGCAAAGCCTAGAGAAGTTGTTGAAAGATGCCATTGTTTATGGTCAACCTCGGACACGAAGGCCCTGGAAGAAAATTCTAATCCTTGTGGAGGGAATATATAGCATGGAGGGATCTATTGTTCGCCTTCCTGAAGTGATTGCCCTTAAGAAGAAATACAAGGCATACTTGTATCTAGATGAAGCTCACAGCATTGGGGCTCTGGGCCCTACAGGACGAGGTGTGGTGGATTACTTTGGCCTGGATCCTGAGGATGTGGACATTATGATGGGAACATTCACAAAGAGCTTTGGTGCTTCTGGAGGATACATCGGAGGCAAGAAGGAGCTGATCGACTATCTGCGGACACATTCTCATAGTGCAGTGTACGCCACATCACTGTCACCACCTGTTGTGGAGCAGATCATCACTTCTATGAAGTGCATCATGGGGCAGGATGGCACCACCCTTGGTAAGTCTTTCTTTTCTTGGAAAATTTCCTGGGCTCAGTAA

Related Sequences

bmy_03483T0 Protein

Length: 355 aa      View alignments
>bmy_03483T0
MQQKEKNKSIFTIFWQDFVSLYQDFENFYTRNLYMRIRDNWNRPICSVPGARVDIMERQSHDYNWSFKYTGNVIKDVINMGSYNYLGFARNTGPCQEAAAKVLEEYGVGVCSTRQEIGNLDKHEELEKLVASFLGVEAAMTYGMGFATNSMNIPALVSKGCLILSDELNHASLVLGARLSGATIRVFKHNNMQSLEKLLKDAIVYGQPRTRRPWKKILILVEGIYSMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVVDYFGLDPEDVDIMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTTLGKSFFSWKISWAQ*