Part of scaffold_101 (Scaffold)

For more information consult the page for scaffold_101 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VASH1 ENSTTRG00000013216 (Bottlenosed dolphin)

Gene Details

vasohibin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012535, Bottlenosed dolphin)

Protein Percentage 95.94%
cDNA percentage 96.46%
Ka/Ks Ratio 0.27624 (Ka = 0.0251, Ks = 0.0907)

VASH1 ENSBTAG00000008735 (Cow)

Gene Details

vasohibin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040667, Cow)

Protein Percentage 94.06%
cDNA percentage 93.33%
Ka/Ks Ratio 0.12787 (Ka = 0.0325, Ks = 0.2544)

VASH1  (Minke Whale)

Gene Details

vasohibin 1

External Links

Gene match (Identifier: BACU010834, Minke Whale)

Protein Percentage 93.56%
cDNA percentage 95.3%
Ka/Ks Ratio 0.48796 (Ka = 0.0413, Ks = 0.0847)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 987 bp    Location:1036246..1020522   Strand:-
>bmy_03502
ATGCCAGGGGGGAAGAAGGTGGTTGGGGGCGGCAGCAGCGGTGCTGCCCCCACTGCCGCTGCTGTCCCCTCTGGGGCCAGGCGTTTGGAGACCAGCGAAGGAGCCTCAGCCCAGAGAGATGATGAGCCAGAAGAAGAAGGGGAAGAGGACCTGCGAGATGGAGGCATCCCCTTCTTTATCAACCGGGGTGGGCTGCCTGTGGACGAGGCCACCTGGGAGAGGATGTGGAAGCACGTGGCTAAGATCCACCCCGATGGAGAGAAGGTGGCTCAGCGGATCCGTGGGGCCATGGACCTGCCCAAGATTCCCATACCGAGTGTGCCTACGTTCCAGCCCTCTACTCCTGTCCCTGAGCGCCTGGAAGCTGTGCAGCGCTACATCAGGGAGCTGCAGCTGATGGACCTGGCCAAGGAAATGACCAAAGAGGCTCTGCCAATCAAATGCCTGGAAGCCGTGATCCTGGGAATGTATCCTTCCTCTGAGAGGCCTAGTTACCTCACCAACAGCATGCCTACCCTGGAACGCTTCCCCATCAGCTTCAAGACCTACTTCTCAGGGAACTACTTCCGCCACATCGTGCTGGGCGTGAACTTCGGCGGCCGCTACGGGGCGCTGGGCATGAGCCGGCGCGAGGACCTGATGTACAAGCCGCCGGCCTTCCGCACGCTCAGCGAGCTCGTGCTGGACTACGAGGCCGCCTACAGCCGCTGCTGGCACGTGTTGAAGAAGGTGAAGCTGGGCCAGTGCGTGTCCCACGACCCGCACAGCGTGGAGCAGATCGAGTGGAAGCACTCGGTCCTGGACGTGGAGAGGCTGGGCCGCGAGGACTTCCGCAAGGAGCTGGAGCGGCATGCCCGCGACATGCGCCTCAAGGTGCGTGTGTGCGGCCGCCCCGCCCGCGAGCGTCCAGGGGCGCCTTCTGGTGAGAAGAAGCCTTCGGAGCCCAAAGCCATGCCAGACCTCAATGGGTACCAGATCCGGGTGTGA

Related Sequences

bmy_03502T0 Protein

Length: 329 aa      View alignments
>bmy_03502T0
MPGGKKVVGGGSSGAAPTAAAVPSGARRLETSEGASAQRDDEPEEEGEEDLRDGGIPFFINRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGAMDLPKIPIPSVPTFQPSTPVPERLEAVQRYIRELQLMDLAKEMTKEALPIKCLEAVILGMYPSSERPSYLTNSMPTLERFPISFKTYFSGNYFRHIVLGVNFGGRYGALGMSRREDLMYKPPAFRTLSELVLDYEAAYSRCWHVLKKVKLGQCVSHDPHSVEQIEWKHSVLDVERLGREDFRKELERHARDMRLKVRVCGRPARERPGAPSGEKKPSEPKAMPDLNGYQIRV*