Sequence detailsbmy_03556 (Coding sequence)

Part of scaffold_106 (SequenceType object (1))

For more information consult the page for scaffold_106 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ALDH6A1ENSTTRG00000006442 (Bottlenosed dolphin)

Gene Details

aldehyde dehydrogenase 6 family, member A1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006098, Bottlenosed dolphin)

Protein Percentage 65.36%
cDNA percentage 65.61%
Ka/Ks Ratio 0.22342 (Ka = 0.0081, Ks = 0.0363)

BT.98765ENSBTAG00000018469 (Cow)

Gene Details

methylmalonate-semialdehyde dehydrogenase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024584, Cow)

Protein Percentage 97.21%
cDNA percentage 94.79%
Ka/Ks Ratio 0.09288 (Ka = 0.0147, Ks = 0.1581)

ALDH6A1 (Minke Whale)

Gene Details

aldehyde dehydrogenase 6 family, member A1

External Links

Gene match (Identifier: BACU010804, Minke Whale)

Protein Percentage 97.92%
cDNA percentage 97.71%
Ka/Ks Ratio 0.30363 (Ka = 0.0141, Ks = 0.0465)

Additional orthologs identified in other species via the OPTIC pipeline.

ALDH6A1 (Human)   Aldh6a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1662 bp    Location:77249..97862   Strand:+
Raw sequence 
>bmy_03556
ATGGCGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCAGTGCGGGCCCGGATCCTGCAGGTTTCTTCCAAGGTGAACTCCAGTTGGCACCCAGCATCCTCCTTCTCTTCATCGTCAGTGCCAACTGTAAAGCTTTTCATTGATGGGAAATTTATTGAATCCAAAAGTGACAAATGGATGGACATCCACAACCCCGCCACCAATGAGGTCATTGGTCGGGTCCCTCAAGCCACCAAGGCTGAAATGGATGCAGCAGTTTCTTCCTGCAAACGTGCTTTTCCCGCATGGGCAGACACTTCAATATTAAGCCGTCAGCAGGTCCTGCTCCGCTATCAACAACTCATTAAAGAAAACTTGAAAGAAATTGCCAGGTTAATCACACTGGAACAAGGRAAGACCCTAGCGGATGCCGAAGGAGATGTATTTCGAGGCCTTCAGGTGGTTGAGCATGCCTGCAGTGTGACATCCCTCATGCTGGGAGAGACCATGCCATCCATCACCAAAGACATGGACCTTTATTCCTACCGTCTGCCTCTGGGGGTGTGTGCAGGCATTGCTCCGTTCAATTTTCCTGCCATGATCCCCCTTTGGATGTTTCCCATGGCCATGGTATGTGGAAATACCTTCCTAATGAAACCATCAGAGCGAGTTCCTGGAGCAACTATACTTCTTGCCAAGTTGCTTCAGGACTCTGGTGCCCCTGACGGAACACTGAATGTCATCCATGGACAACATGAAGCTGTAAACTTTATTTGTGACCATCTTGATATCAAAGCAATCAGCTTTGTGGGATCCAACCAGGCAGGAGAGTACATCTTTGAGAGAGGGTCAAGACATGGCAAGAGAGTTCAAGCCAATATGGGAGCCAAAAACCATGGGGTAGTCATGCCAGATGCCAATAAGGAAAATACTCTGAACCAGCTGGTTGGGGCAGCATTTGGAGCCGCTGGTCAGCGCTGCATGGCTCTTTCAACAGCGATCCTTGTGGGAGAAGCTAAGAAGTGGCTGCCAGAGCTGGTAGAGCGTGCCAAAAAACTGAGAGTCAATGCAGGAGACCAGCCTGGAGCTGACCTTGGCCCTCTGATCACCCCCCACGCAAAAGAGCGAGTCTGCAATCTGATTGATAGTGGAACAAAGGAAGGAGCTTCCATCCTTCTTGACGGGCGAGATATTAAAGTCAAAGGTTATGAAAATGGGAACTTTGTTGGGCCAACCATCATCTCAAATGTCAAGCCAAATATGACCTGTTACAAAGAGGAGATTTTTGGCCCAGTTCTTGTAGTTCTGGAAACAGACACTTTGGATGAAGCCATCAAGATCGTAAATGACAACCCGTATGGAAATGGAACTGCCATCTTCACCACCAATGGAGCCACTGCTCGGAAGTATTCCCACCTGGTAGATGTCGGACAGGTCGGGGTGAATGTGCCCATTCCAGTGCCTTTGCCAATGTTCTCATTCACCGGCTCTCGAGCTTCCTTCAGGGGAGACACCAATTTCTATGGCAAACAGGAACAAGGATTCTGCAAGGAAGGGCCTGCCAGCAGCTTCTGTGAAGTTGGCATCCAGTTCTACACTCAGCTAAAAACTGTCACTTCACAGTGGAAAGAAGAAGATGCTTCTCTTTCCTCACCGGCTGTAGTCATGCCTACCATGGGCCGTTAG

Related Sequences

bmy_03556T0 SequenceType object (3)

Length: 554 aa      View alignments
>bmy_03556T0
MAAVAAVAAAAAVRARILQVSSKVNSSWHPASSFSSSSVPTVKLFIDGKFIESKSDKWMDIHNPATNEVIGRVPQATKAEMDAAVSSCKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGATILLAKLLQDSGAPDGTLNVIHGQHEAVNFICDHLDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELVERAKKLRVNAGDQPGADLGPLITPHAKERVCNLIDSGTKEGASILLDGRDIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRASFRGDTNFYGKQEQGFCKEGPASSFCEVGIQFYTQLKTVTSQWKEEDASLSSPAVVMPTMGR*