Part of scaffold_106 (Scaffold)

For more information consult the page for scaffold_106 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBAP1 ENSTTRG00000010592 (Bottlenosed dolphin)

Gene Details

ubiquitin associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010042, Bottlenosed dolphin)

Protein Percentage 95.39%
cDNA percentage 97.53%
Ka/Ks Ratio 1.00448 (Ka = 0.0237, Ks = 0.0236)

UBAP1 ENSBTAG00000000320 (Cow)

Gene Details

ubiquitin-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000036333, Cow)

Protein Percentage 92.4%
cDNA percentage 94.27%
Ka/Ks Ratio 0.32441 (Ka = 0.0375, Ks = 0.1157)

UBAP1  (Minke Whale)

Gene Details

ubiquitin associated protein 1

External Links

Gene match (Identifier: BACU019733, Minke Whale)

Protein Percentage 96.15%
cDNA percentage 97.44%
Ka/Ks Ratio 0.45198 (Ka = 0.019, Ks = 0.0421)

Genome Location

Sequence Coding sequence

Length: 1503 bp    Location:120513..122015   Strand:+
>bmy_03558
ATGGCTTCTAAGAAGTTGGGTGCAGATTTTCATGGGACTTTCAGTTACCTTGATGATGTCCCATTTAAGATAGGAGACAAATTCAAAACACTAGCTATAGTTGGTCTACCTATTGGCTTCTCCTTGCCTGACTGTTTGCAGGTTGTCAGAGAAGTACAGAATGGTTTCTCTTTGGAAAAGAAAACCATTGAGTGGGCTGAAGATATTAAGAAAATCCAAGAAGCCCAGTGGGAAGCAGAGCGCAAGGCTGAGGAAGCAGAAGCTAAAGTGAATTCTAAGAGTGGCCCAGAGGGTGACAGCAAAATGAGCTTCTCCAAGACTCACAGTACAGCCACAATGCCACCTCCTATCAATCCCATCCTTGCCAGCTTACAGCATAACATCACCCCGACTCGGGTCAGCAGCAGTGCCACAAGACAGAAAGTTCTCAGCCCACCCCACACAAAGGCAGATTTCAATCCTGCTGACTTTGAGTGTGAAGAAGACCTGTTTGATAATCTGGAGTTAAAAACTATTGATGAGAAGGAAGAGCTGAGAAACATTCTGGTAGGAACCAGTGGACCCATTATGGCCCAGTTATTGGACAGTAACTTGCCTAGAGGTGGCTCTGGGTCTGTGTTACAGGATGAGGAGGTCCTGGCATCCCTRGAGMGGGCAACCCTAGATTTCAAGCCTCTTMACAAACCCAATGGCTTTATAACCTTACCACAGTTGGGCAACTGTGAAAAGATGTCGCTGTCTTCCAAAGTGTCCCTCCCCCCCATCCCTGCAGTAAGCAATATCAAGTCCCTGTCCTTCCCCAAACTTGACTCTGATGACAGCAGTCAGAAGACAGCCAAGATGGCAAGCACTTTCCACAGCACATCCTGCCTCCGCAGTGGCACGTTCCAGAATTCCCTAAAGCCTTCCACCCAAAGCAGTGCCAGTGAGCTCAATGGGCATCATACTCTTGGGCTTTCAGCTTTGAATTTGGACAGTGGCACAGAGGTGCCAACCCTGACCCATTCTCAGATGCCTTCCCTCTCTGTCTTGTCTGTGTGCACAGAAGAATCATCACCTCCAAATACCTGTCCCAAGGTCACACCTCCTAATTCCTCAATGTCACAAGTGCCCAACACTCCCAGCTGTCCCCAGGCTTATTCTGAAATGCAGACGCTGTCCCCCAGTGAGCGGCAATGTGTGGAGACGGTGATCAACATGGGCTACTCATATGAGTGTGTCTTGAAAGTCGTGAAGAAGAAAGGAGAGAATATTGAGCAGATTCTCGACTATCCCTTTGCACATGGACAGCTCTGTGAGAAGGGCTTTGACCCTCTTTTAGTGGAAGAGGCTCTGGAAATGCAGCAGTGTTCAGAGGAAAAGATGATGGAGTTTCTTCAGTTAATGAGCAAATTTAAGGAAATGGGCTTTGAACTGAAAGATATTAAGGAAGTTCTGCTATTACACAACAACGACCAGGACACTGCCTTGGAAGACCTCATGGCTCGGGCGGGAGCCAGCTGA

Related Sequences

bmy_03558T0 Protein

Length: 501 aa      View alignments
>bmy_03558T0
MASKKLGADFHGTFSYLDDVPFKIGDKFKTLAIVGLPIGFSLPDCLQVVREVQNGFSLEKKTIEWAEDIKKIQEAQWEAERKAEEAEAKVNSKSGPEGDSKMSFSKTHSTATMPPPINPILASLQHNITPTRVSSSATRQKVLSPPHTKADFNPADFECEEDLFDNLELKTIDEKEELRNILVGTSGPIMAQLLDSNLPRGGSGSVLQDEEVLASLERATLDFKPLXKPNGFITLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSSQKTAKMASTFHSTSCLRSGTFQNSLKPSTQSSASELNGHHTLGLSALNLDSGTEVPTLTHSQMPSLSVLSVCTEESSPPNTCPKVTPPNSSMSQVPNTPSCPQAYSEMQTLSPSERQCVETVINMGYSYECVLKVVKKKGENIEQILDYPFAHGQLCEKGFDPLLVEEALEMQQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDTALEDLMARAGAS*