Sequence details bmy_03789 (Coding sequence)

Part of scaffold_116 (Scaffold)

For more information consult the page for scaffold_116 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RHBDD1 ENSTTRG00000015048 (Bottlenosed dolphin)

Gene Details

rhomboid domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014266, Bottlenosed dolphin)

Protein Percentage 68.62%
cDNA percentage 72.7%
Ka/Ks Ratio 1.00693 (Ka = 0.0524, Ks = 0.052)

RHBDD1 ENSBTAG00000023963 (Cow)

Gene Details

rhomboid domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032900, Cow)

Protein Percentage 90.48%
cDNA percentage 91.71%
Ka/Ks Ratio 0.31315 (Ka = 0.0554, Ks = 0.177)

Additional orthologs identified in other species via the OPTIC pipeline.

RHBDD1 (Human)   Rhbdd1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 570 bp    Location:811088..812919   Strand:+
Raw sequence 
>bmy_03789
ATGCAGCGGAGGTCAAGAGGAATTAATATTGGGCTGCTTCTGCTCCTTTCTCAAATCTTCCACGTTGGGATCAACAATATTCCACCTGTCACCCTAGCAACTTTGGCTCTCAACATCTGGTTCTTCTTGAATCCTCTGAAGCCGCTGCTTAGCTCCTGCCTTAGCGTGGAGAAGTGTTACCAGCAAAAAGACTGGCAGCGCTTACTGCTTTCCCCTCTTCACCATGTGGATGATTGGCACTTGTATTTCAATATGGCATCCATGCTCTGGAAAGGAATTCATCTGGAAAGAAGACTAGGAAGTAGATGGTTTGCCTACATCATCACCACGTTCTCCCTACTCACTGGGGTGGTGTACCTCTTCTTGGAATTTGCTCTGGCAGAACTTATGGATGAACCTGACCTCAGAAGCAACTGTGCTGTAGGTTTCTCAGGAGTTTTGTTTGCTTTGAAAGTTCTTAACAACCATTATTGCCCTGGAGGCTTTGTCAACGTTTTGGGCTTTCCTGTACCCAACAAATTTGCTTGTTGGGCAGAACTCTTGGCTATTCATTTCATCTCGCCAGGGTAA

Related Sequences

bmy_03789T0 Protein

Length: 190 aa      View alignments
>bmy_03789T0
MQRRSRGINIGLLLLLSQIFHVGINNIPPVTLATLALNIWFFLNPLKPLLSSCLSVEKCYQQKDWQRLLLSPLHHVDDWHLYFNMASMLWKGIHLERRLGSRWFAYIITTFSLLTGVVYLFLEFALAELMDEPDLRSNCAVGFSGVLFALKVLNNHYCPGGFVNVLGFPVPNKFACWAELLAIHFISPG*