Part of scaffold_118 (SequenceType object (1))

For more information consult the page for scaffold_118 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

XRCC6BP1ENSTTRG00000015602 (Bottlenosed dolphin)

Gene Details

XRCC6 binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014781, Bottlenosed dolphin)

Protein Percentage 94.22%
cDNA percentage 95.76%
Ka/Ks Ratio 0.31333 (Ka = 0.0311, Ks = 0.0994)

XRCC6BP1ENSBTAG00000017543 (Cow)

Gene Details

mitochondrial inner membrane protease ATP23 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042356, Cow)

Protein Percentage 91.91%
cDNA percentage 91.52%
Ka/Ks Ratio 0.16693 (Ka = 0.0444, Ks = 0.2661)

XRCC6BP1 (Minke Whale)

Gene Details

XRCC6 binding protein 1

External Links

Gene match (Identifier: BACU008171, Minke Whale)

Protein Percentage 95.38%
cDNA percentage 96.92%
Ka/Ks Ratio 0.34977 (Ka = 0.024, Ks = 0.0688)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 522 bp    Location:139167..128520   Strand:-
>bmy_03861
ATGGTCCCCCAACTGGTGCCTGATCCATATGTTAAACTGCTGCTTGATGCCATGAAGCATTCGGGTTGTGGAGGTTTTGATGCTTCAGTGTCTCAGATTGTTTTGTGCCAGAATAATATCTGTAATCAGGCCCATATGAACAGAGTGGTCACCCATGAGCTCATTCATGCATTCGATCATTGTCGAGCTCATGTCGACTGGTTCACCGACGTCAGGCACTTGGCCTGCTCTGAGGTTCGAGCTGCTAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATACTCAGGTTACATTTTGGATTAAAACAACACCATCAGACTTGTGTGCGAGACAGAGCCATTCGTTCTATCCTGGCTGTTAGGAACATCAGCAAAGAAGTAGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTCAATGACCATGAACCTTTTGGAAGGATCCCTCATAATAAGACCTATGCAAGATATGCTCATAGAGACTTTCAAAACCGGGATCGGTACTACTCAAATATATGA

Related Sequences

bmy_03861T0 SequenceType object (3)

Length: 174 aa      View alignments
>bmy_03861T0
MVPQLVPDPYVKLLLDAMKHSGCGGFDASVSQIVLCQNNICNQAHMNRVVTHELIHAFDHCRAHVDWFTDVRHLACSEVRAANLSGDCSLLNEILRLHFGLKQHHQTCVRDRAIRSILAVRNISKEVAQKAVDEVFESCFNDHEPFGRIPHNKTYARYAHRDFQNRDRYYSNI*