Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CYP27B1 ENSTTRG00000008345 (Bottlenosed dolphin)

Gene Details

cytochrome P450, family 27, subfamily B, polypeptide 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007906, Bottlenosed dolphin)

Protein Percentage 97.44%
cDNA percentage 98.23%
Ka/Ks Ratio 0.39731 (Ka = 0.0126, Ks = 0.0316)

BT.61430 ENSBTAG00000016906 (Cow)

Gene Details

25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022485, Cow)

Protein Percentage 92.5%
cDNA percentage 92.97%
Ka/Ks Ratio 0.22857 (Ka = 0.04, Ks = 0.175)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1608 bp    Location:286934..291506   Strand:+
>bmy_03867
ATGACCCAGACCCTCAAGCTCGCTTCCAGAGTGTTCCATCGCGTCCGCTGCTCTCCTGAGCTGGGCGCCTCACTGGGCTCCAGAGGCTCGGACTCAGCGCCCCGGGGCTTGGCGGACATCCCAGGCCCCTCCACGCCCGGCTTCCTTGCTGAACTTTTCTGCAAGGGGGGACTGTCACGGCTACACGAGCTTCAGGTGCAGGGCGCCACGTGCTTTGGGCCGGTGTGGTTGGCCAGCTTCGGGACGGTGCGCACTGTGTACGTGGCGACCCCTACACTCATTGAGCAGCTGCTACGACAGGAGGGACCCCGGCCCGAACGCTGCAGCTTCTCACCCTGGGCGGAGCACCGTCGCCGCTGCCAGCGGGCTTGCGGACTGCTCACCGCGGAAGGCGAAGAATGGCAGAGGCTCCGCAGCCTCCTGGCCCCGCTCCTCCTCCGGCCTCAAGCGGCCGCCCGCTATGCCGGGACCCTGCACAACGTGGTCGGTGACCTTGTGCGGCGACTGCGGCGCCAGCGGGGACTGGGCGCTGGGCCGCCCGCCCTGGTTCGAGACGTGGCAGGAGAGTTTTACAAGTTTGGACTAGAAGGTGAGTCCCTAGACAGGGGCAAGTGTAGGAGGCACCTGGTCCGGGTCTCCCGGTGCCCTGACAGCGCCCCCTCCCGGCCAGGCATCGCTGCGGTGCTGCTGGGTTCCCGCCTCGGCTGCCTGGAGGCCGAAGTGCCACCAGACACAGAGACCTTCATCCGCGCGGTGAGATCGGTGTTTGTGTCCACACTGTTGACCATGGCGATGCCCAGTTGGCTGCACCGCCTCGTGCCCGGACCCTGGGGCCGCCTCTGCCGAGACTGGGACCAGATGTTTGCATTTGCCCAGCAGCACGTGGAGCGGCGAGAGGCCGAGGTAGCCATGAGGAGCCAGGGAAAGTCTGAGGAGGACACGGGATTTGGGGCGCACCTGACCTACTTCCTGTTCCGGGAAGAGTTGCCTGCCCCGTCCATCCTAGGGAATGTGACAGAGCTGCTACTGGCTGGAGTGGACACGGTGTCCAACACGCTCTCCTGGGCTCTGTATGAACTCTCTCGGCACCCCGAAGTCCAGACGGCACTCCGTTCTGAGATCACAGCTGCCTTGGGCCCCGGCTCCAGTGCCCACCCCTCAGCCACTGCTCTGTCGCAGGTGCCCCTGCTGAAGGCTGTGATCAGGGAAGTGCTAAGACTGTACCCTGTGGTACCTGGAAATTCCCGTGTCCCAGACAAAGACATTTGTGTGGGTGACTATATTATCCCCAAAAATACGCTGGTCACTCTGTGTCACTATGCCACTTCAAGGGATCCCGCCCAGTTCCCAGAGCCAAATTCTTTTCGTCCAGCTCGCTGGCTAGGGGATGGTCCAGCCCCCCACCCATTTGCATCTCTCCCCTTTGGCTTTGGCAAGCGCAGCTGCATGGGGAGACGCCTGGCAGAGCTTGAGCTGCAAATGGCTTTGGCCCAGATCTTGATCCACTTTGAGGTGCAGCCTGAGCCAGGTGCTGCCCCAGTCAGACCCATGACCCGGACTGTCCTGGTACCTGAGAGAAGCATCAACCTACAGTTTGTGGACAGATAG

Related Sequences

bmy_03867T0 Protein

Length: 536 aa      View alignments
>bmy_03867T0
MTQTLKLASRVFHRVRCSPELGASLGSRGSDSAPRGLADIPGPSTPGFLAELFCKGGLSRLHELQVQGATCFGPVWLASFGTVRTVYVATPTLIEQLLRQEGPRPERCSFSPWAEHRRRCQRACGLLTAEGEEWQRLRSLLAPLLLRPQAAARYAGTLHNVVGDLVRRLRRQRGLGAGPPALVRDVAGEFYKFGLEGESLDRGKCRRHLVRVSRCPDSAPSRPGIAAVLLGSRLGCLEAEVPPDTETFIRAVRSVFVSTLLTMAMPSWLHRLVPGPWGRLCRDWDQMFAFAQQHVERREAEVAMRSQGKSEEDTGFGAHLTYFLFREELPAPSILGNVTELLLAGVDTVSNTLSWALYELSRHPEVQTALRSEITAALGPGSSAHPSATALSQVPLLKAVIREVLRLYPVVPGNSRVPDKDICVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGDGPAPHPFASLPFGFGKRSCMGRRLAELELQMALAQILIHFEVQPEPGAAPVRPMTRTVLVPERSINLQFVDR*