Sequence detailsbmy_03867 (Coding sequence)

Part of scaffold_118 (SequenceType object (1))

For more information consult the page for scaffold_118 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CYP27B1ENSTTRG00000008345 (Bottlenosed dolphin)

Gene Details

cytochrome P450, family 27, subfamily B, polypeptide 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007906, Bottlenosed dolphin)

Protein Percentage 97.44%
cDNA percentage 98.23%
Ka/Ks Ratio 0.39731 (Ka = 0.0126, Ks = 0.0316)

BT.61430ENSBTAG00000016906 (Cow)

Gene Details

25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022485, Cow)

Protein Percentage 92.5%
cDNA percentage 92.97%
Ka/Ks Ratio 0.22857 (Ka = 0.04, Ks = 0.175)

Additional orthologs identified in other species via the OPTIC pipeline.

CYP27B1 (Human)   Cyp27b1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1608 bp    Location:286934..291506   Strand:+
Raw sequence 
>bmy_03867
ATGACCCAGACCCTCAAGCTCGCTTCCAGAGTGTTCCATCGCGTCCGCTGCTCTCCTGAGCTGGGCGCCTCACTGGGCTCCAGAGGCTCGGACTCAGCGCCCCGGGGCTTGGCGGACATCCCAGGCCCCTCCACGCCCGGCTTCCTTGCTGAACTTTTCTGCAAGGGGGGACTGTCACGGCTACACGAGCTTCAGGTGCAGGGCGCCACGTGCTTTGGGCCGGTGTGGTTGGCCAGCTTCGGGACGGTGCGCACTGTGTACGTGGCGACCCCTACACTCATTGAGCAGCTGCTACGACAGGAGGGACCCCGGCCCGAACGCTGCAGCTTCTCACCCTGGGCGGAGCACCGTCGCCGCTGCCAGCGGGCTTGCGGACTGCTCACCGCGGAAGGCGAAGAATGGCAGAGGCTCCGCAGCCTCCTGGCCCCGCTCCTCCTCCGGCCTCAAGCGGCCGCCCGCTATGCCGGGACCCTGCACAACGTGGTCGGTGACCTTGTGCGGCGACTGCGGCGCCAGCGGGGACTGGGCGCTGGGCCGCCCGCCCTGGTTCGAGACGTGGCAGGAGAGTTTTACAAGTTTGGACTAGAAGGTGAGTCCCTAGACAGGGGCAAGTGTAGGAGGCACCTGGTCCGGGTCTCCCGGTGCCCTGACAGCGCCCCCTCCCGGCCAGGCATCGCTGCGGTGCTGCTGGGTTCCCGCCTCGGCTGCCTGGAGGCCGAAGTGCCACCAGACACAGAGACCTTCATCCGCGCGGTGAGATCGGTGTTTGTGTCCACACTGTTGACCATGGCGATGCCCAGTTGGCTGCACCGCCTCGTGCCCGGACCCTGGGGCCGCCTCTGCCGAGACTGGGACCAGATGTTTGCATTTGCCCAGCAGCACGTGGAGCGGCGAGAGGCCGAGGTAGCCATGAGGAGCCAGGGAAAGTCTGAGGAGGACACGGGATTTGGGGCGCACCTGACCTACTTCCTGTTCCGGGAAGAGTTGCCTGCCCCGTCCATCCTAGGGAATGTGACAGAGCTGCTACTGGCTGGAGTGGACACGGTGTCCAACACGCTCTCCTGGGCTCTGTATGAACTCTCTCGGCACCCCGAAGTCCAGACGGCACTCCGTTCTGAGATCACAGCTGCCTTGGGCCCCGGCTCCAGTGCCCACCCCTCAGCCACTGCTCTGTCGCAGGTGCCCCTGCTGAAGGCTGTGATCAGGGAAGTGCTAAGACTGTACCCTGTGGTACCTGGAAATTCCCGTGTCCCAGACAAAGACATTTGTGTGGGTGACTATATTATCCCCAAAAATACGCTGGTCACTCTGTGTCACTATGCCACTTCAAGGGATCCCGCCCAGTTCCCAGAGCCAAATTCTTTTCGTCCAGCTCGCTGGCTAGGGGATGGTCCAGCCCCCCACCCATTTGCATCTCTCCCCTTTGGCTTTGGCAAGCGCAGCTGCATGGGGAGACGCCTGGCAGAGCTTGAGCTGCAAATGGCTTTGGCCCAGATCTTGATCCACTTTGAGGTGCAGCCTGAGCCAGGTGCTGCCCCAGTCAGACCCATGACCCGGACTGTCCTGGTACCTGAGAGAAGCATCAACCTACAGTTTGTGGACAGATAG

Related Sequences

bmy_03867T0 SequenceType object (3)

Length: 536 aa      View alignments
>bmy_03867T0
MTQTLKLASRVFHRVRCSPELGASLGSRGSDSAPRGLADIPGPSTPGFLAELFCKGGLSRLHELQVQGATCFGPVWLASFGTVRTVYVATPTLIEQLLRQEGPRPERCSFSPWAEHRRRCQRACGLLTAEGEEWQRLRSLLAPLLLRPQAAARYAGTLHNVVGDLVRRLRRQRGLGAGPPALVRDVAGEFYKFGLEGESLDRGKCRRHLVRVSRCPDSAPSRPGIAAVLLGSRLGCLEAEVPPDTETFIRAVRSVFVSTLLTMAMPSWLHRLVPGPWGRLCRDWDQMFAFAQQHVERREAEVAMRSQGKSEEDTGFGAHLTYFLFREELPAPSILGNVTELLLAGVDTVSNTLSWALYELSRHPEVQTALRSEITAALGPGSSAHPSATALSQVPLLKAVIREVLRLYPVVPGNSRVPDKDICVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGDGPAPHPFASLPFGFGKRSCMGRRLAELELQMALAQILIHFEVQPEPGAAPVRPMTRTVLVPERSINLQFVDR*