Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

B4GALNT1 ENSTTRG00000016792 (Bottlenosed dolphin)

Gene Details

beta-1,4-N-acetyl-galactosaminyl transferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015920, Bottlenosed dolphin)

Protein Percentage 96.8%
cDNA percentage 97.55%
Ka/Ks Ratio 0.36998 (Ka = 0.0165, Ks = 0.0446)

GALGT ENSBTAG00000004494 (Cow)

Gene Details

beta-1,4 N-acetylgalactosaminyltransferase 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005893, Cow)

Protein Percentage 95.5%
cDNA percentage 95.25%
Ka/Ks Ratio 0.15174 (Ka = 0.0211, Ks = 0.1393)

B4GALNT1  (Minke Whale)

Gene Details

beta-1,4-N-acetyl-galactosaminyl transferase 1

External Links

Gene match (Identifier: BACU020485, Minke Whale)

Protein Percentage 98.68%
cDNA percentage 99.0%
Ka/Ks Ratio 0.29937 (Ka = 0.006, Ks = 0.0201)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1602 bp    Location:408071..415419   Strand:+
>bmy_03873
ATGCGGCTGGGCCGCCGGGCCCTCTGTGTGCTGGTCCTGCTGCTCGCCTGCGCCTCGCTGGGGCTCCTGTACGCGAGCACCCGGGTCGCACCGGGCCTCCAGGCACCTCTTGCGCTGTGGACGCCCCGGCAGGGCAACCCCAGGCCAGAATTGCCAGGTCTTGCCCCCGAGCCCCGGTACGCACACATCCCAGTCAGGATCAAGGAGCAAGTGGTGGGGCTGCTGTCCACAAACAATTGCAGTTGTGAATCCAGTGGGGGGAGCCTTCACCTCCCCTTCCAGAGGCAGGTCCAAGCCATTGACTTCACCAAGGCCTTTGACTCTGAGGAGCTGAGGGCTGCGTCTGCCTTGAGGGAGCAGGAGTTCCAGGCCTTCCTTTCAAGGAGCCAGTCTGCTGCTGACCAGCTGCTCATAGCCCCTGCCAACTCCCCACTACAGTACCCACTGCAGGGTGTGGAGGTCCAGCCCCTCAGGAGCATCTTGGTGCCAGGACTGAGCCTGCAGGCCACTTCTGGTCAGGAGGTATACCAGGTGAACCTGACTGCCTCCTTGGGCACCTGGGACGTGGCAGGGGAAGTGACTGGAGTGACTCTCACTGGAGAGGGGCAGCCAGATCTCACCCTCGCCAGCCCAGGGCTGGACCAACTCAATCGGCAGCTGCAACTGGTCACTTATAGCAGCCGAAGCTACCAGGCAAACACAGCAGACATAGTCCGGTTCTCCACCGAGGGACACGAAGTTGCCTTCACCATACGCATAAGACACCCACCCAGCCCTCAGCTGTACCCACCTGGGTCTCTACCCCTGGGAGCCCAGTACAACATCAGCGCTCTGGTYACCATTGCCACTAAGACCTTCCTTCGTTACAATCGGCTACGGGCACTCATCGCCAGCATCCGCCGCTTCTACCCGACAGTCACAGTGGTAATCGCCGACGACAGCGACAAGCCAGAAAGTATTAGAGGTCCCCACATCGAGCACTATCTCATGCCTTTTGGCAAGGGCTGGTTCGCAGGCCGGAACCTGGCCGTATCCCAAGTAACCACCAAGTACGTGCTGTGGGTGGACGACGACTTCGTCTTCACGGCGCGGACACGACTGGAGAGGCTTGTGGACGTGCTGGAGCGGACGCCGCTGGACCTGGTGGGGGGCGCGGTGCGCGAGATCTCCGGCTTCGCCACCACCTACCGGCAGCTGCTGAGCGTGGAGCCCGGCGCGCCAGGCCGCGGGAACTGCCTCCGGCAGAAGCGCGGCTTCCACCACGAGCTCGTCGGCTTCCCAGGGTGCGTGGTCACCGACGGCGTGGTCAACTTCTTCCTGGCGCGCACTGACAAGGTGCGCGAGGTCGGCTTTGACCCGCGCCTCAGCCGCGTGGCGCACCTGGAATTCTTCCTGGATGGACTTGGTTCTCTTCGGGTGGGCTCCTGCTCAGACGTTGTTGTGGATCATGCATCCAAGTTGAAGTTGCCTTGGACATCAAGGGATGCTAGGGCAGAGACTTACGCTCGGTACCGTTACCCAGGATCACTGGATGAAAGTCAGGTGGCCAAACACCGCCTGCTCTTCTTCAAACACCGGCTCCAGTGCATGACCTCAGAGTGA

Related Sequences

bmy_03873T0 Protein

Length: 534 aa      View alignments
>bmy_03873T0
MRLGRRALCVLVLLLACASLGLLYASTRVAPGLQAPLALWTPRQGNPRPELPGLAPEPRYAHIPVRIKEQVVGLLSTNNCSCESSGGSLHLPFQRQVQAIDFTKAFDSEELRAASALREQEFQAFLSRSQSAADQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQATSGQEVYQVNLTASLGTWDVAGEVTGVTLTGEGQPDLTLASPGLDQLNRQLQLVTYSSRSYQANTADIVRFSTEGHEVAFTIRIRHPPSPQLYPPGSLPLGAQYNISALVTIATKTFLRYNRLRALIASIRRFYPTVTVVIADDSDKPESIRGPHIEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFVFTARTRLERLVDVLERTPLDLVGGAVREISGFATTYRQLLSVEPGAPGRGNCLRQKRGFHHELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVVVDHASKLKLPWTSRDARAETYARYRYPGSLDESQVAKHRLLFFKHRLQCMTSE*