Sequence details bmy_03884 (Coding sequence)

Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GLI1 ENSTTRG00000013086 (Bottlenosed dolphin)

Gene Details

GLI family zinc finger 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012416, Bottlenosed dolphin)

Protein Percentage 98.41%
cDNA percentage 98.32%
Ka/Ks Ratio 0.20291 (Ka = 0.0078, Ks = 0.0384)

GLI1 ENSBTAG00000006631 (Cow)

Gene Details

zinc finger protein GLI1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008704, Cow)

Protein Percentage 94.95%
cDNA percentage 94.11%
Ka/Ks Ratio 0.15606 (Ka = 0.0249, Ks = 0.1595)

GLI1  (Minke Whale)

Gene Details

GLI family zinc finger 1

External Links

Gene match (Identifier: BACU008154, Minke Whale)

Protein Percentage 98.94%
cDNA percentage 99.04%
Ka/Ks Ratio 0.27308 (Ka = 0.0053, Ks = 0.0192)

Additional orthologs identified in other species via the OPTIC pipeline.

GLI1 (Human)   Gli1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3216 bp    Location:548822..541532   Strand:-
Raw sequence 
>bmy_03884
ATGTTCAACTCGATGACCCCACCGCCAGTCAGTAGCTATGGCGAGCCCTGCTGTCTCCGGCCCCTCCCCAGTCAGGGGGCCCCCAGCATGGGGACAGAAGGACTGCCTGGCCTGCCCTTCTGCCACCAGGCCACCCTCATGTCCGGCCCCCACAGTTACGGGCCAGCCAGAGAGACCAGCAGCTGCACGGAGGCCCCACTGTTTCCTCCTCCCCGGAGTGCAGTCAAATTGACCAAGAAGCGGGCTCTCTCCATCTCACCTCTGTCAGACGCCAGCCTGGACCTGCAGACAGTTATCCGCACCTCACCCAGCTCCCTCGTGGCCTTCATCAACTCACGCTGTGCATCTCCGGGGGGCTCCTATGGTCACCTCTCCATCGGCACCATGAGCCCATCTCTGGGATTCTCACCCCAGATGAATCACCAAAAAGGGACCTCGCCTTCCTTCGGGGTCCAGCCCTGTGGTCCCCATGACCCCACCCAGGGTGGGATGATGCCACATCCTCAGTCCCGGGGACCCCTCTCAACTTGCCAGCTGAAGTCTGAGCTGGATGCGCTGCTTAGCAAGTGCCCGGAGGAGCCCTTGGAAGGTGATATGTGCAGCCCCAACTCCACGGGCACACAGGATCCCCTGCTGGGGATGCTGGATGGGCGGGAAGACCTGGAGAGAGAGGAGAAGCCTGAGCATGATTCTGTGTATGAGACTGACTGCCGCTGGGATGGCTGCAGTCAGGAGTTCGACTCCCAGGAGCAGCTGGTGCATCACATCAACAGCGAGCACATCCACGGAGAGCGGAAGGAGTTTGTGTGCCATTGGGGGGGCTGCTCCAGGGAGCTGAGGCCCTTCAAAGCTCAGTACATGCTGGTGGTGCACATGCGCAGACACACAGGCGAAAAGCCACATAAGTGCACGTTTGAGGGGTGCCGGAAGTCATACTCACGCCTGGAAAATCTGAAGACACACCTGCGGTCACACACGGGTGAGAAGCCATACATGTGTGAACACGAGGGCTGCAGTAAAGCCTTCAGCAATGCCAGTGACCGAGCCAAGCACCAGAATCGGACCCACTCCAATGAGAAGCCCTATGTGTGTAAGCTCCCTGGCTGCACCAAACGTTACACAGATCCCAGCTCACTCCGGAAACATGTCAAGACAGTGCATGGTCCTGACGCCCACGTGACCAAGCGGCACCGAGGAGATGGCCCCCTGCCCCGGGCACCGGCTCTTTCCACAGTGGAGCCCAAGAGGGAGCGGGACGGAGGCCCCATCAGGGAGGAGAGCAGACTGACTGTGCCGGAGGGTGCCATGAAACCACAGCCAAGCCCTGGGGCCCAGTCGTCCTGCAGCAGTGACCACTCCCCAGCAGGCAGTGCAGCCAATACAGACAGTGGTGTGGAAATGACTGGAAATGCAGGGGGCAGCACTGAGGACCTGTCCAGCTTGGACGAGGGGCCTTGCATTGCTGGCACTGGCACCCCTGGGTCTCGCCGTCTGGGCCCGCCAGTATCTCTTGACCGCCGCAGCAGCAGCTCCAGCAGCGTCAGCTCAGCCTATACTGTCAGCCGCCGCTCCTCCCTGGCTTCCCCTTTCCCCCCTGGTTCACCACCAGAGAATGGGGCATGCTCTCTGCCTGGCCTCACGCCTGCCCAGCACTACCTGCTCCGGGCAAGATATGCTTCAGCCAGGGGAGGTGGTACCCCACCCACTGCAGCACCCAGCCTGGATCGGATGGGGGGTCTTCCTGCACCTCCCTGGAGAAGCCGAGCCGAGTATCCAGGATACAACCCCAATGTAGGGGTCACCCGGAGGGCCAGTGACCCAGCCCGGTCTGCTGACCGCCCTGCCCCAGCCAGAGTCCAGCGGTTCAAGAGCTTGGGTTGTGTCCACACACCCCCCACAGTGGCAGGAGGAGGACGGAACTTTGATCCCCAACTCCCAACCTCTGTCTACTCACCACAGCCCCCCAGCATCACTGAGAATGTCGCCATGGATACCAAAGGGCTACGGGAGGAGCCAGAGGTTGGGACCTCCATGATGGGCAGTGGTCTGAACCCCTATATGGACTTCCCGCCTGCTGATACTCTGGGATATGGGGGACCTGAGGGGGCAGCAGCTGAGCCTTATGGAGCTAGAGGTCCAGGCTCCCTGCCTCTTGGGCCTGGTCCATCTACCAACTACGGCCCCAACCCCTGTCCCCAGCAGGTCTCCTATCCTGAACCCACCCCAGAAACATGGGGTGAGTTCCCTTCCCACTCTGGGCTGTACCCAGGCCCCAAGCCTCCAGCTGGAGCCTACGGCCAGTGTCCTCGTCTTGAACATTATGGACAAGTGCAGGTGAAGCCGGAACAGGGGTGTCCAGTGGGTTCTGACTCCACAGGACTGGCACCCTGCCTCAATGCCCACCCCAGTGAGGGGCCTCCACGCTCACAGCCTCTATTCTCCCACTACCCCCAGCCTCCCCCTCCCCAGTATCCCCAGTCAGGCACCTATACCCAGCCACCTCCTGATTATCTTCCTTCAGAACCCAGGCCCAGCCTGGATTTTGAGTTCCCTACTCATTCTACAGGACAGCTCAAGGCACAGCTTGTGTGTAATTATGTTCAGTCTCAACAGGAGCTGCTGTGGGAGGGAGGGGGCAGGGGAGATCCCCCAGTCCAGGACCCTCTCTACCAGAGTCCCAAGTTTCTGGGGGGTTCCCAGGTTAGCCTGAGCCCTGCCAAGGCACAAGTGGCCACATATGGACCTGGCTTTGCACCTAACTTGCCCAATCACAAGTCAGGCTCCTATCCTACCCCTTCACCATGCCATGAAAATTTTGCAGTAGGGGCAAACAAGGCTTCCCATAGGGCAGCAGCACCACCCCGACTTCTGCCTCCACTACCCACTTGCTATGGGCCCCTCAAGGCAGGGGGCACCAACCCTAGCTGTGGCCATCCTGAGGTGGGCAGGCTGGGAGGGGGCCCAGCCTTGTACCCTCCTCCTGAAGGGCAGGTGTGTAACCCTCTGGACTCTCTTGATCTCGACAACACTCAGCTGGACTTTGTGGCTATTCTGGATGAGCCCCAGGGGCTGAGTCCTCCCCCCTCCCATGATCAGAGGGACAGCTCTGAACATATCCCACCTCCTTCTGGGACCCCCAACATGGCTGTGGGCAACATGAGTGTCTTACTGGGATCCCTGCCTGGGGAGACACAGTTCCTCAACTCTAGTGCTTAA

Related Sequences

bmy_03884T0 Protein

Length: 1072 aa      View alignments
>bmy_03884T0
MFNSMTPPPVSSYGEPCCLRPLPSQGAPSMGTEGLPGLPFCHQATLMSGPHSYGPARETSSCTEAPLFPPPRSAVKLTKKRALSISPLSDASLDLQTVIRTSPSSLVAFINSRCASPGGSYGHLSIGTMSPSLGFSPQMNHQKGTSPSFGVQPCGPHDPTQGGMMPHPQSRGPLSTCQLKSELDALLSKCPEEPLEGDMCSPNSTGTQDPLLGMLDGREDLEREEKPEHDSVYETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPALSTVEPKRERDGGPIREESRLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGVEMTGNAGGSTEDLSSLDEGPCIAGTGTPGSRRLGPPVSLDRRSSSSSSVSSAYTVSRRSSLASPFPPGSPPENGACSLPGLTPAQHYLLRARYASARGGGTPPTAAPSLDRMGGLPAPPWRSRAEYPGYNPNVGVTRRASDPARSADRPAPARVQRFKSLGCVHTPPTVAGGGRNFDPQLPTSVYSPQPPSITENVAMDTKGLREEPEVGTSMMGSGLNPYMDFPPADTLGYGGPEGAAAEPYGARGPGSLPLGPGPSTNYGPNPCPQQVSYPEPTPETWGEFPSHSGLYPGPKPPAGAYGQCPRLEHYGQVQVKPEQGCPVGSDSTGLAPCLNAHPSEGPPRSQPLFSHYPQPPPPQYPQSGTYTQPPPDYLPSEPRPSLDFEFPTHSTGQLKAQLVCNYVQSQQELLWEGGGRGDPPVQDPLYQSPKFLGGSQVSLSPAKAQVATYGPGFAPNLPNHKSGSYPTPSPCHENFAVGANKASHRAAAPPRLLPPLPTCYGPLKAGGTNPSCGHPEVGRLGGGPALYPPPEGQVCNPLDSLDLDNTQLDFVAILDEPQGLSPPPSHDQRDSSEHIPPPSGTPNMAVGNMSVLLGSLPGETQFLNSSA*