Sequence detailsbmy_03888 (Coding sequence)

Part of scaffold_118 (SequenceType object (1))

For more information consult the page for scaffold_118 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STAC3ENSTTRG00000013081 (Bottlenosed dolphin)

Gene Details

SH3 and cysteine rich domain 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012411, Bottlenosed dolphin)

Protein Percentage 98.53%
cDNA percentage 99.41%
Ka/Ks Ratio 1.51414 (Ka = 0.0064, Ks = 0.0043)

STAC3ENSBTAG00000018358 (Cow)

Gene Details

SH3 and cysteine-rich domain-containing protein 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024422, Cow)

Protein Percentage 96.39%
cDNA percentage 96.3%
Ka/Ks Ratio 0.14361 (Ka = 0.0151, Ks = 0.1049)

STAC3 (Minke Whale)

Gene Details

SH3 and cysteine rich domain 3

External Links

Gene match (Identifier: BACU018304, Minke Whale)

Protein Percentage 99.41%
cDNA percentage 99.71%
Ka/Ks Ratio 0.44287 (Ka = 0.0024, Ks = 0.0055)

Additional orthologs identified in other species via the OPTIC pipeline.

STAC3 (Human)   Stac3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1191 bp    Location:722438..728673   Strand:+
Raw sequence 
>bmy_03888
ATGACAGAAAAGGAGGTGCTGGAGTCCTCCTGCTTCCCAGCAGAGACTCGGCARAGTGGGCTACAGCGGCTGAAGCAATTATTCAGGAAGGAGTCTACAGGGACAAAGGAGATGGAGCTTCCCCCAGAGCCCCAGGCCAATGGGGAGGCAGTGGGAGCTGGGGGTGGGCCCATCTACTACATCTATGAGGAAGAGGAGGAAGAAGAGGAGGAGGAGCCACCCCCAGAACCTCCTAAGCTTGTTAATGATAAGCCCCACAAATTCAAAGATCATTTCTTCAAGAAGCCCAAGTTCTGTGATGTCTGTGCCCGGATGATTGTGCTCAACAACAAATTTGGGCTTCGCTGTAAGAACTGCAAAACTAACATCCACGAACACTGTCAGTCCTATGTGGAGATGCAGAGATGCTTCGGCAAGATCCCCCCTGGTTTCCGTCGGGCCTATAGCTCCCCTCTCTACAGCAACCAGCAGTACGCTTGTGTCAAAGATCTCTCTGCTGCCAATCGCAATGACCCTGTGTTTGAAACCCTTCGCACTGGGGTGATCATGGCAAACAAGGAACGGAAGAAGGGACAGGCAGATAAAAAAAATTGCCCTCTCCAGTCTCTAGCAGCCATGATGGAAGAGGAGCCAGAGTCTGCCAGACCACAGGAAGGCAAACCCCAGAATGGAAACCCTGATGGGGATAAGAAAGCTGAAAAGAAGACACCTGATGACAAAGTGAGAATATTTTCTCCCTACGGGGACCCCAGTCCTCTCCCCAACCCAGTCTGGGACAGAGATGCCCTGAGACTCATCACCCCCTTTCACCCCCAGCACAAGCAGCCTGGCTTCCAGCAGTCTCATTACTTTGTGGCTCTCTATCGATTCAAAGCCCTGGAGAAGGACGATCTGGATTTCCCGCCTGGAGAGAAGATCACAGTCATTGATGACTCCAATGAGGAGTGGTGGCGGGGGAAAATAGGGGAGAAGGTCGGATTTTTCCCTCCAAACTTCATCATTCGGGTCCGGTCTGGAGAGCGTGTGCACCGCGTAACGAGATCCTTCGTGGGGAACCGCGAGATAGGGCAGATCACTCTCAAGAAGGACCAGATTGTGGTGCAGAAAGGAGATGAAGCCGGTGGCTACGTCAAGGTCTACACCGGCCGCAAGGTGGGGCTGTTTCCCACCGACTTCCTGGAGGAGATTTAG

Related Sequences

bmy_03888T0 SequenceType object (3)

Length: 397 aa      View alignments
>bmy_03888T0
MTEKEVLESSCFPAETRQSGLQRLKQLFRKESTGTKEMELPPEPQANGEAVGAGGGPIYYIYEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFRRAYSSPLYSNQQYACVKDLSAANRNDPVFETLRTGVIMANKERKKGQADKKNCPLQSLAAMMEEEPESARPQEGKPQNGNPDGDKKAEKKTPDDKVRIFSPYGDPSPLPNPVWDRDALRLITPFHPQHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRSGERVHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI*