Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSD17B6 ENSTTRG00000000793 (Bottlenosed dolphin)

Gene Details

hydroxysteroid (17-beta) dehydrogenase 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000746, Bottlenosed dolphin)

Protein Percentage 90.91%
cDNA percentage 93.82%
Ka/Ks Ratio 0.69579 (Ka = 0.0598, Ks = 0.0859)

HSD17B6 ENSBTAG00000011720 (Cow)

Gene Details

17-beta-hydroxysteroid dehydrogenase type 6 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015564, Cow)

Protein Percentage 85.66%
cDNA percentage 88.34%
Ka/Ks Ratio 0.42066 (Ka = 0.0977, Ks = 0.2323)

HSD17B6  (Minke Whale)

Gene Details

hydroxysteroid (17-beta) dehydrogenase 6

External Links

Gene match (Identifier: BACU008144, Minke Whale)

Protein Percentage 70.59%
cDNA percentage 75.87%
Ka/Ks Ratio 0.48773 (Ka = 0.2565, Ks = 0.5259)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 978 bp    Location:1083306..1064346   Strand:-
>bmy_03903
ATGGCTTGTGACCCTATGTTCACCCCAGATTCCAAGGCAACCAGAGAGGTCAATTCATGGGGCCCCAAACCTTCCTGCTTCCTCCCTGGGGCCCTGTCACTGACCAAGACCTGGGCTGGTGAGGATGGGATCTGGAGACTGATGATGGGGAAGGAGGAACAAAGAAGGGACATCCTGAGGCAGGTAGTGAGCCACCTCCAGGACAAGTTCGTCTTCATCACGGGCTGTGACTCGGGCTTCGGGAACCTGCTGGCCAGGCAGCTGCACCTGCGAGGCTTGAGGGTTCTGGCTGCGTGTCTGACGGAGCAGGGGGCCGAGCAGCTGAGGAACCAGACGTCAGACAGGTTGGAGACGGTGATCCTGGACGTCACCAAGACTGAGAGTATCGCTGCGGCCACTGAGTGGGTGAAGGAGCGTGTGGGGGACAGAGTGAACCTCATTGGTTTGATAGAGGTGACCTTGAACATGCTTCCCTTGGTAAGGAGAGCACAGGGGAGGATTGTCAATGTCTCCAGCATTCTGGGAAGAATTGCTTTCTTTGGAGGAGTCTACTCTTCCACCAAGTATGGAGTGGAAGCCTTTTCAGATATTCTGAGGCGTGAGCTTCAACATTTTGGGGTGAAAATCAGCATAGTTGAACCTGGCTACTTCAGAACAGGAATGACAGATATGCAGAAGTCCTCAGAGGCAGTGAAACAAGTCTGGAAAGAAGTCCCTGTGCATATTAAGGAGTCCTATGGACAGAAGTTTTTTGATACCTATCAAGATCTCCTGAAACAAGGGATGTTGAGTTGTAGCACAAACCTGAACCTGGTTACTGACTGTATGGAACATGCCCTGACATCTGTGCATCCCCGCACTCGATACTCAGCTGGTTGGGATGCTCAATTTTTCTTCATCCCTCTATCTTATTTACCTACATCACTGGCAGACTACATATTGACTAGATCTTGGCCCAAACCAGCCCAGGCAGTCTAA

Related Sequences

bmy_03903T0 Protein

Length: 326 aa      View alignments
>bmy_03903T0
MACDPMFTPDSKATREVNSWGPKPSCFLPGALSLTKTWAGEDGIWRLMMGKEEQRRDILRQVVSHLQDKFVFITGCDSGFGNLLARQLHLRGLRVLAACLTEQGAEQLRNQTSDRLETVILDVTKTESIAAATEWVKERVGDRVNLIGLIEVTLNMLPLVRRAQGRIVNVSSILGRIAFFGGVYSSTKYGVEAFSDILRRELQHFGVKISIVEPGYFRTGMTDMQKSSEAVKQVWKEVPVHIKESYGQKFFDTYQDLLKQGMLSCSTNLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYLPTSLADYILTRSWPKPAQAV*